BLASTX nr result

ID: Cimicifuga21_contig00041357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041357
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2...    73   2e-11
ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2...    73   2e-11
gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]           72   5e-11
ref|XP_002527657.1| multidrug resistance protein 1, 2, putative ...    70   1e-10
ref|XP_002869639.1| multidrug resistance protein 2 [Arabidopsis ...    69   4e-10

>ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1245

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/69 (53%), Positives = 44/69 (63%)
 Frame = +3

Query: 3    KELTKVNGNIEIWSVNFSYPSRADIAIFKDFNLQVSAGKSMAXXXXXXXXXXXXXXXXXR 182
            +EL  V+G IE+  +NFSYPSR D+ IFKDFNL+V AGKS+A                 R
Sbjct: 993  EELKTVDGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSVALVGQSGSGKSSVISLILR 1052

Query: 183  FYDPTSGRV 209
            FYDPTSGRV
Sbjct: 1053 FYDPTSGRV 1061


>ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1246

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/69 (53%), Positives = 44/69 (63%)
 Frame = +3

Query: 3    KELTKVNGNIEIWSVNFSYPSRADIAIFKDFNLQVSAGKSMAXXXXXXXXXXXXXXXXXR 182
            +EL  V+G IE+  +NFSYPSR D+ IFKDFNL+V AGKS+A                 R
Sbjct: 993  EELKTVDGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSVALVGQSGSGKSSVISLILR 1052

Query: 183  FYDPTSGRV 209
            FYDPTSGRV
Sbjct: 1053 FYDPTSGRV 1061


>gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]
          Length = 1249

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/69 (52%), Positives = 44/69 (63%)
 Frame = +3

Query: 3    KELTKVNGNIEIWSVNFSYPSRADIAIFKDFNLQVSAGKSMAXXXXXXXXXXXXXXXXXR 182
            +ELT V G IE+  V+FSYPSR D+ IFKDF+L+V +GKSMA                 R
Sbjct: 995  EELTNVEGTIELKGVHFSYPSRPDVVIFKDFDLKVRSGKSMALVGQSGSGKSSVLALILR 1054

Query: 183  FYDPTSGRV 209
            FYDPTSG+V
Sbjct: 1055 FYDPTSGKV 1063



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/69 (39%), Positives = 39/69 (56%)
 Frame = +3

Query: 3   KELTKVNGNIEIWSVNFSYPSRADIAIFKDFNLQVSAGKSMAXXXXXXXXXXXXXXXXXR 182
           ++L+KV GNIE+ +V+FSYPSR D+ IF  F L +  GK +A                 R
Sbjct: 360 RKLSKVEGNIELKNVSFSYPSRPDVVIFDRFCLNIPTGKIVALVGGSGSGKSTVISLIER 419

Query: 183 FYDPTSGRV 209
           FY+P +G +
Sbjct: 420 FYEPLAGEI 428


>ref|XP_002527657.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223532962|gb|EEF34728.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1156

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/69 (50%), Positives = 44/69 (63%)
 Frame = +3

Query: 3    KELTKVNGNIEIWSVNFSYPSRADIAIFKDFNLQVSAGKSMAXXXXXXXXXXXXXXXXXR 182
            +EL  V GNIE+  V FSYPSR D++IFKDF+L+V +GKS+A                 R
Sbjct: 1003 EELKNVEGNIELIGVEFSYPSRPDVSIFKDFDLRVRSGKSVALVGQSGSGKSSVLSLILR 1062

Query: 183  FYDPTSGRV 209
            FYDPT+GRV
Sbjct: 1063 FYDPTAGRV 1071


>ref|XP_002869639.1| multidrug resistance protein 2 [Arabidopsis lyrata subsp. lyrata]
            gi|297315475|gb|EFH45898.1| multidrug resistance protein
            2 [Arabidopsis lyrata subsp. lyrata]
          Length = 1233

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/69 (50%), Positives = 42/69 (60%)
 Frame = +3

Query: 3    KELTKVNGNIEIWSVNFSYPSRADIAIFKDFNLQVSAGKSMAXXXXXXXXXXXXXXXXXR 182
            +ELT V G IE+  V+FSYPSR D+ IF+DF+L V AGKSMA                 R
Sbjct: 981  EELTNVEGTIELKGVHFSYPSRPDVVIFRDFDLIVRAGKSMALVGQSGSGKSSVISLILR 1040

Query: 183  FYDPTSGRV 209
            FYDPT G+V
Sbjct: 1041 FYDPTGGKV 1049


Top