BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041300
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34329.1| Integrase core domain containing protein [Solanum...    89   2e-22
gb|ABI34342.1| Polyprotein, putative [Solanum demissum]                89   6e-22
emb|CAN73763.1| hypothetical protein VITISV_031179 [Vitis vinifera]    88   2e-21
emb|CAN78616.1| hypothetical protein VITISV_003658 [Vitis vinifera]    86   2e-21
emb|CAN60609.1| hypothetical protein VITISV_036599 [Vitis vinifera]    86   2e-21

>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score = 89.4 bits (220), Expect(2) = 2e-22
 Identities = 40/65 (61%), Positives = 49/65 (75%)
 Frame = -1

Query: 196 NRMPTVGLNNQTPFSLLYPRLFRFPLVPRVFGCVAFVHILEPGQDKLSPRARKCVFLGYS 17
           NRMP+  + NQ P S+L+P+   +P+ PRVFG   FVH L PG+DKL+PRA KCVFLGYS
Sbjct: 681 NRMPSSSIQNQVPHSILFPQSHLYPIPPRVFGSTCFVHNLAPGKDKLAPRALKCVFLGYS 740

Query: 16  RSQKG 2
           R QKG
Sbjct: 741 RVQKG 745



 Score = 41.2 bits (95), Expect(2) = 2e-22
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = -3

Query: 287 LLDVARTLIFKMQVPKPFWADAVLTACHLI 198
           L++ ARTL+ +  VP  FW DAVLT+C+LI
Sbjct: 651 LIETARTLLLESNVPLRFWGDAVLTSCYLI 680


>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score = 89.4 bits (220), Expect(2) = 6e-22
 Identities = 40/65 (61%), Positives = 49/65 (75%)
 Frame = -1

Query: 196 NRMPTVGLNNQTPFSLLYPRLFRFPLVPRVFGCVAFVHILEPGQDKLSPRARKCVFLGYS 17
           NRMP+  + NQ P S+L+P+   +P+ PRVFG   FVH L PG+DKL+PRA KCVFLGYS
Sbjct: 442 NRMPSSSIQNQVPHSILFPQSHLYPIPPRVFGSTCFVHNLAPGKDKLAPRALKCVFLGYS 501

Query: 16  RSQKG 2
           R QKG
Sbjct: 502 RVQKG 506



 Score = 39.7 bits (91), Expect(2) = 6e-22
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = -3

Query: 287 LLDVARTLIFKMQVPKPFWADAVLTACHLI 198
           L++ ARTL+ +  VP  FW DAVL++C+LI
Sbjct: 412 LIETARTLLIESHVPLRFWGDAVLSSCYLI 441


>emb|CAN73763.1| hypothetical protein VITISV_031179 [Vitis vinifera]
          Length = 564

 Score = 87.8 bits (216), Expect(2) = 2e-21
 Identities = 42/65 (64%), Positives = 50/65 (76%)
 Frame = -1

Query: 196 NRMPTVGLNNQTPFSLLYPRLFRFPLVPRVFGCVAFVHILEPGQDKLSPRARKCVFLGYS 17
           NRMP+  L++Q P+SLL+P    + L PRVFGC  FVHIL PGQDKLS +A KC+FLGYS
Sbjct: 197 NRMPSSVLHDQIPYSLLFPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCLFLGYS 256

Query: 16  RSQKG 2
           R QKG
Sbjct: 257 RLQKG 261



 Score = 39.7 bits (91), Expect(2) = 2e-21
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = -3

Query: 287 LLDVARTLIFKMQVPKPFWADAVLTACHLI 198
           L++ ART++    VP  FW DAVLTAC+LI
Sbjct: 167 LVETARTILLHSNVPFRFWEDAVLTACYLI 196


>emb|CAN78616.1| hypothetical protein VITISV_003658 [Vitis vinifera]
          Length = 2172

 Score = 86.3 bits (212), Expect(2) = 2e-21
 Identities = 42/65 (64%), Positives = 49/65 (75%)
 Frame = -1

Query: 196  NRMPTVGLNNQTPFSLLYPRLFRFPLVPRVFGCVAFVHILEPGQDKLSPRARKCVFLGYS 17
            NRMP+  L++Q P SLL+P    + L PRVFGC  FVHIL PGQDKLS +A KC+FLGYS
Sbjct: 1316 NRMPSSVLHDQIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCLFLGYS 1375

Query: 16   RSQKG 2
            R QKG
Sbjct: 1376 RLQKG 1380



 Score = 40.8 bits (94), Expect(2) = 2e-21
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = -3

Query: 287  LLDVARTLIFKMQVPKPFWADAVLTACHLI 198
            L++ ARTL+    VP  FW DAVLTAC+LI
Sbjct: 1286 LVETARTLLLHSHVPFRFWGDAVLTACYLI 1315


>emb|CAN60609.1| hypothetical protein VITISV_036599 [Vitis vinifera]
          Length = 1455

 Score = 86.3 bits (212), Expect(2) = 2e-21
 Identities = 42/65 (64%), Positives = 49/65 (75%)
 Frame = -1

Query: 196 NRMPTVGLNNQTPFSLLYPRLFRFPLVPRVFGCVAFVHILEPGQDKLSPRARKCVFLGYS 17
           NRMP+  L++Q P SLL+P    + L PRVFGC  FVHIL PGQDKLS +A KC+FLGYS
Sbjct: 778 NRMPSSVLHDQIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCLFLGYS 837

Query: 16  RSQKG 2
           R QKG
Sbjct: 838 RLQKG 842



 Score = 40.8 bits (94), Expect(2) = 2e-21
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = -3

Query: 287 LLDVARTLIFKMQVPKPFWADAVLTACHLI 198
           L++ ARTL+    VP  FW DAVLTAC+LI
Sbjct: 748 LVETARTLLLHSHVPFRFWGDAVLTACYLI 777