BLASTX nr result

ID: Cimicifuga21_contig00041279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041279
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299238.1| AP2 domain-containing transcription factor [...    62   4e-08
ref|XP_002303888.1| AP2 domain-containing transcription factor [...    59   4e-07
emb|CBI16410.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002285539.1| PREDICTED: AP2-like ethylene-responsive tran...    57   1e-06
emb|CAN74963.1| hypothetical protein VITISV_011083 [Vitis vinifera]    57   1e-06

>ref|XP_002299238.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222846496|gb|EEE84043.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 530

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = +3

Query: 12  ASESHHFALGLFNEPME-PVEEQDWISNNSLGNQGVLKAEDFLGVGRSGTTSEISLFNQF 188
           AS  H F+LGL N+ ME P + Q+W   N+ GN  V K  DFLGV +S   S++  FN+ 
Sbjct: 24  ASHPHQFSLGLVNDNMENPFQTQEWSLLNTQGNNEVPKVADFLGVSKSENQSDLVAFNEI 83

Query: 189 QPTQSEYQYLPN 224
           Q + SEY +  N
Sbjct: 84  QASDSEYLFSSN 95


>ref|XP_002303888.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222841320|gb|EEE78867.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 524

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  ASESHHFALGLFNEPME-PVEEQDW-ISNNSLGNQGVLKAEDFLGVGRSGTTSEISLFNQ 185
           AS  H F+LGL N+ ME P + Q+W + N   GN  V K  DFLGV +S   S++  FN+
Sbjct: 24  ASHPHQFSLGLVNDNMENPFQTQEWSLLNTHQGNNEVPKVADFLGVSKSENQSDLVAFNE 83

Query: 186 FQPTQSEYQYLPNCTI 233
            Q  +S+Y +  N  +
Sbjct: 84  IQANESDYLFSNNSLV 99


>emb|CBI16410.3| unnamed protein product [Vitis vinifera]
          Length = 535

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +3

Query: 12  ASESHHFALGLFNEPME-PVEEQDWISNNSLGNQGVLKAEDFLGVGRSGTTSEISLFNQF 188
           AS++  F+LGL N+ ME P + Q+W   NS G+  V K  DFLGV +S   +++  FN+ 
Sbjct: 24  ASQAQQFSLGLVNDNMESPFQNQEWNLINSHGSSEVPKIADFLGVSKSENQADLEAFNEI 83

Query: 189 QPTQSEYQYLPN 224
           Q   S+Y + PN
Sbjct: 84  QANDSDY-FFPN 94


>ref|XP_002285539.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           PLT2-like [Vitis vinifera]
          Length = 552

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +3

Query: 12  ASESHHFALGLFNEPME-PVEEQDWISNNSLGNQGVLKAEDFLGVGRSGTTSEISLFNQF 188
           AS++  F+LGL N+ ME P + Q+W   NS G+  V K  DFLGV +S   +++  FN+ 
Sbjct: 24  ASQAQQFSLGLVNDNMESPFQNQEWNLINSHGSSEVPKIADFLGVSKSENQADLEAFNEI 83

Query: 189 QPTQSEYQYLPN 224
           Q   S+Y + PN
Sbjct: 84  QANDSDY-FFPN 94


>emb|CAN74963.1| hypothetical protein VITISV_011083 [Vitis vinifera]
          Length = 552

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +3

Query: 12  ASESHHFALGLFNEPME-PVEEQDWISNNSLGNQGVLKAEDFLGVGRSGTTSEISLFNQF 188
           AS++  F+LGL N+ ME P + Q+W   NS G+  V K  DFLGV +S   +++  FN+ 
Sbjct: 27  ASQAQQFSLGLVNDNMESPFQNQEWNLINSHGSSEVPKIADFLGVSKSENQADLEAFNEI 86

Query: 189 QPTQSEYQYLPN 224
           Q   S+Y + PN
Sbjct: 87  QANDSDY-FFPN 97


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