BLASTX nr result
ID: Cimicifuga21_contig00041239
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00041239 (310 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFH57280.1| putative peripheral-type benzodiazepine receptor ... 115 5e-24 ref|XP_002531881.1| peripheral-type benzodiazepine receptor, put... 108 3e-22 ref|XP_002301472.1| predicted protein [Populus trichocarpa] gi|2... 105 5e-21 ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267... 103 1e-20 ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|2... 100 2e-19 >gb|AFH57280.1| putative peripheral-type benzodiazepine receptor [Gossypium hirsutum] Length = 189 Score = 115 bits (287), Expect = 5e-24 Identities = 52/74 (70%), Positives = 62/74 (83%) Frame = +1 Query: 88 NRRDKKMAMAKRGLRSLAIAIATPLSLTLTTIFLFGSGQNYHNVEKPFWYPPLWALHLAC 267 NRR+K+MAMAKRGLRSL IA++ PLSLTL I+LFGSG+ Y ++ KPFW+PPLW LH C Sbjct: 28 NRREKRMAMAKRGLRSLVIAVSFPLSLTLLNIYLFGSGRGYASLAKPFWFPPLWLLHTGC 87 Query: 268 VASSVLMGLSAWLV 309 +ASS LMGLSAW V Sbjct: 88 LASSFLMGLSAWFV 101 >ref|XP_002531881.1| peripheral-type benzodiazepine receptor, putative [Ricinus communis] gi|223528489|gb|EEF30518.1| peripheral-type benzodiazepine receptor, putative [Ricinus communis] Length = 190 Score = 108 bits (271), Expect = 3e-22 Identities = 52/75 (69%), Positives = 61/75 (81%), Gaps = 1/75 (1%) Frame = +1 Query: 88 NRRDKKMAMAKRGLRSLAIAIATPLSLTLTTIFLFGSGQNYHNVE-KPFWYPPLWALHLA 264 +RRDK+MAMAKRG+RSLAIA+A PLSLTL I+ FGS Y + KPFW+PP+WALH Sbjct: 28 SRRDKRMAMAKRGIRSLAIAVAFPLSLTLFNIYFFGSRNGYGPLSTKPFWFPPMWALHFT 87 Query: 265 CVASSVLMGLSAWLV 309 C+ASS LMGLSAWLV Sbjct: 88 CLASSFLMGLSAWLV 102 >ref|XP_002301472.1| predicted protein [Populus trichocarpa] gi|224100985|ref|XP_002334319.1| predicted protein [Populus trichocarpa] gi|222843198|gb|EEE80745.1| predicted protein [Populus trichocarpa] gi|222870389|gb|EEF07520.1| predicted protein [Populus trichocarpa] Length = 197 Score = 105 bits (261), Expect = 5e-21 Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 5/78 (6%) Frame = +1 Query: 91 RRDKKMAMAKRGLRSLAIAIATPLSLTLTTIFLFGSGQNY-----HNVEKPFWYPPLWAL 255 RR+K++AMA+RG+RSLAIA+A PLSL L ++ FGS + Y ++ KPFW+PPLWAL Sbjct: 32 RREKRVAMAQRGIRSLAIAVALPLSLALCNVYFFGSTKGYGTSSSRSISKPFWFPPLWAL 91 Query: 256 HLACVASSVLMGLSAWLV 309 H+ CV SS LMGLSAWLV Sbjct: 92 HMTCVTSSFLMGLSAWLV 109 >ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267613 [Vitis vinifera] Length = 185 Score = 103 bits (258), Expect = 1e-20 Identities = 47/73 (64%), Positives = 58/73 (79%) Frame = +1 Query: 91 RRDKKMAMAKRGLRSLAIAIATPLSLTLTTIFLFGSGQNYHNVEKPFWYPPLWALHLACV 270 +R+KKMAMAKRGLRSL A++ PLSLTL TI+ G+ Y + KPFW+PPLWA+H + Sbjct: 25 KREKKMAMAKRGLRSLTTAVSIPLSLTLVTIYFSGATDRYRTLPKPFWFPPLWAVHATSM 84 Query: 271 ASSVLMGLSAWLV 309 ASS+LMGLSAWLV Sbjct: 85 ASSLLMGLSAWLV 97 >ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|222861790|gb|EEE99332.1| predicted protein [Populus trichocarpa] Length = 199 Score = 100 bits (248), Expect = 2e-19 Identities = 45/77 (58%), Positives = 61/77 (79%), Gaps = 4/77 (5%) Frame = +1 Query: 91 RRDKKMAMAKRGLRSLAIAIATPLSLTLTTIFLFGSGQNYH----NVEKPFWYPPLWALH 258 +R+K++AMAKRG+RSLAIA+A PLSLT++ ++ FG+ + Y ++ PFW+PP WALH Sbjct: 35 KREKRVAMAKRGIRSLAIAVALPLSLTISNLYFFGTTRGYGTSTGSISMPFWFPPPWALH 94 Query: 259 LACVASSVLMGLSAWLV 309 L C+ SS LMGLSAWLV Sbjct: 95 LTCMTSSFLMGLSAWLV 111