BLASTX nr result

ID: Cimicifuga21_contig00041239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041239
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH57280.1| putative peripheral-type benzodiazepine receptor ...   115   5e-24
ref|XP_002531881.1| peripheral-type benzodiazepine receptor, put...   108   3e-22
ref|XP_002301472.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267...   103   1e-20
ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>gb|AFH57280.1| putative peripheral-type benzodiazepine receptor [Gossypium
           hirsutum]
          Length = 189

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/74 (70%), Positives = 62/74 (83%)
 Frame = +1

Query: 88  NRRDKKMAMAKRGLRSLAIAIATPLSLTLTTIFLFGSGQNYHNVEKPFWYPPLWALHLAC 267
           NRR+K+MAMAKRGLRSL IA++ PLSLTL  I+LFGSG+ Y ++ KPFW+PPLW LH  C
Sbjct: 28  NRREKRMAMAKRGLRSLVIAVSFPLSLTLLNIYLFGSGRGYASLAKPFWFPPLWLLHTGC 87

Query: 268 VASSVLMGLSAWLV 309
           +ASS LMGLSAW V
Sbjct: 88  LASSFLMGLSAWFV 101


>ref|XP_002531881.1| peripheral-type benzodiazepine receptor, putative [Ricinus
           communis] gi|223528489|gb|EEF30518.1| peripheral-type
           benzodiazepine receptor, putative [Ricinus communis]
          Length = 190

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/75 (69%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
 Frame = +1

Query: 88  NRRDKKMAMAKRGLRSLAIAIATPLSLTLTTIFLFGSGQNYHNVE-KPFWYPPLWALHLA 264
           +RRDK+MAMAKRG+RSLAIA+A PLSLTL  I+ FGS   Y  +  KPFW+PP+WALH  
Sbjct: 28  SRRDKRMAMAKRGIRSLAIAVAFPLSLTLFNIYFFGSRNGYGPLSTKPFWFPPMWALHFT 87

Query: 265 CVASSVLMGLSAWLV 309
           C+ASS LMGLSAWLV
Sbjct: 88  CLASSFLMGLSAWLV 102


>ref|XP_002301472.1| predicted protein [Populus trichocarpa]
           gi|224100985|ref|XP_002334319.1| predicted protein
           [Populus trichocarpa] gi|222843198|gb|EEE80745.1|
           predicted protein [Populus trichocarpa]
           gi|222870389|gb|EEF07520.1| predicted protein [Populus
           trichocarpa]
          Length = 197

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 5/78 (6%)
 Frame = +1

Query: 91  RRDKKMAMAKRGLRSLAIAIATPLSLTLTTIFLFGSGQNY-----HNVEKPFWYPPLWAL 255
           RR+K++AMA+RG+RSLAIA+A PLSL L  ++ FGS + Y      ++ KPFW+PPLWAL
Sbjct: 32  RREKRVAMAQRGIRSLAIAVALPLSLALCNVYFFGSTKGYGTSSSRSISKPFWFPPLWAL 91

Query: 256 HLACVASSVLMGLSAWLV 309
           H+ CV SS LMGLSAWLV
Sbjct: 92  HMTCVTSSFLMGLSAWLV 109


>ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267613 [Vitis vinifera]
          Length = 185

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/73 (64%), Positives = 58/73 (79%)
 Frame = +1

Query: 91  RRDKKMAMAKRGLRSLAIAIATPLSLTLTTIFLFGSGQNYHNVEKPFWYPPLWALHLACV 270
           +R+KKMAMAKRGLRSL  A++ PLSLTL TI+  G+   Y  + KPFW+PPLWA+H   +
Sbjct: 25  KREKKMAMAKRGLRSLTTAVSIPLSLTLVTIYFSGATDRYRTLPKPFWFPPLWAVHATSM 84

Query: 271 ASSVLMGLSAWLV 309
           ASS+LMGLSAWLV
Sbjct: 85  ASSLLMGLSAWLV 97


>ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|222861790|gb|EEE99332.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/77 (58%), Positives = 61/77 (79%), Gaps = 4/77 (5%)
 Frame = +1

Query: 91  RRDKKMAMAKRGLRSLAIAIATPLSLTLTTIFLFGSGQNYH----NVEKPFWYPPLWALH 258
           +R+K++AMAKRG+RSLAIA+A PLSLT++ ++ FG+ + Y     ++  PFW+PP WALH
Sbjct: 35  KREKRVAMAKRGIRSLAIAVALPLSLTISNLYFFGTTRGYGTSTGSISMPFWFPPPWALH 94

Query: 259 LACVASSVLMGLSAWLV 309
           L C+ SS LMGLSAWLV
Sbjct: 95  LTCMTSSFLMGLSAWLV 111


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