BLASTX nr result

ID: Cimicifuga21_contig00041235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041235
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]    41   6e-07
emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera]    40   1e-06
emb|CAN80288.1| hypothetical protein VITISV_006820 [Vitis vinifera]    39   2e-06
ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249...    39   2e-06
emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]    38   5e-06

>emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]
          Length = 1653

 Score = 41.2 bits (95), Expect(2) = 6e-07
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
 Frame = -1

Query: 231  WVEDWVLGKWGQPLMEAFEVIYNVSDKKNVLVKNM*KEFNGVGSWNLWL---LNDWEVEV 61
            W++ W      + L + F  ++ ++  KN  V  +     G G WNL L   LNDWE++ 
Sbjct: 1525 WMDKWC---GNEXLSQTFPXLFTLAGHKNAKVCEVWDSSLGQGGWNLSLARDLNDWEIDQ 1581

Query: 60   RAGMTHLLDQAVIREEDNS 4
               M +LL    I +E++S
Sbjct: 1582 IGEMLNLLKDFRISQEEDS 1600



 Score = 37.0 bits (84), Expect(2) = 6e-07
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -2

Query: 344  WRARVYQLVPTPYGCSMWKGIMRDREEFSKHLKFKLGFGSRIGFWV 207
            WR +    V  PYG  +WK IM++ E   + +  K+G G+R+ FW+
Sbjct: 1484 WRTKE---VCGPYGXGLWKEIMKEAEWCWESMDLKVGKGNRVLFWM 1526


>emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera]
          Length = 1930

 Score = 39.7 bits (91), Expect(2) = 1e-06
 Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = -1

Query: 231  WVEDWVLGKWGQPLMEAFEVIYNVSDKKNVLVKNM*KEFNGVGSWNLWL---LNDWEV-E 64
            W + W      Q L EAF +++N+S  K   V    +E  G GSW L     LNDWEV E
Sbjct: 1828 WKDLWC---GNQSLEEAFPILFNLSVNKEGWVAEAWEEDEGGGSWGLRFNRHLNDWEVGE 1884

Query: 63   VRAGMTHLLDQAVIR 19
            V + ++ LL   + R
Sbjct: 1885 VESLLSKLLPLTIRR 1899



 Score = 37.7 bits (86), Expect(2) = 1e-06
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 308  YGCSMWKGIMRDREEFSKHLKFKLGFGSRIGFW 210
            YG  +WK I +  E F  H +F +G G+R+ FW
Sbjct: 1796 YGVGVWKAIRKGWENFRSHSRFIIGDGTRVKFW 1828


>emb|CAN80288.1| hypothetical protein VITISV_006820 [Vitis vinifera]
          Length = 1894

 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
 Frame = -1

Query: 231  WVEDWVLGKWGQPLMEAFEVIYNVSDKKNVLVKNM*KEFNGVGSWNLWL---LNDWEVEV 61
            W++ W      + L + F  ++ ++  KN  V  +     G G WNL L    NDWE++ 
Sbjct: 1672 WMDKWC---GNEALSQTFPQLFTLAGHKNAKVCEVWDSSLGQGGWNLSLARDFNDWEIDQ 1728

Query: 60   RAGMTHLLDQAVIREEDNS 4
               M +LL    I +E++S
Sbjct: 1729 IGEMLNLLKDFRISQEEDS 1747



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -2

Query: 344  WRARVYQLVPTPYGCSMWKGIMRDREEFSKHLKFKLGFGSRIGFWV 207
            WR +    V  PYG  +WK IM++ E   + +  K+G G+R+ FW+
Sbjct: 1631 WRTKE---VCGPYGVGLWKEIMKEAEWCWESMDLKVGKGNRVLFWM 1673


>ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249836 [Vitis vinifera]
          Length = 1552

 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
 Frame = -1

Query: 231 WVEDWVLGKWGQPLMEAFEVIYNVSDKKNVLVKNM*KEFNGVGSWNLWL---LNDWEVEV 61
           W++ W      + L + F  ++ ++  KN  V  +     G G WNL L   LNDWE++ 
Sbjct: 483 WMDKWC---GNEALSQTFPQLFTLAGHKNAKVCEVWDSSLGQGGWNLSLARDLNDWEIDQ 539

Query: 60  RAGMTHLLDQAVIREEDNS 4
              M + L    I +E++S
Sbjct: 540 IGEMLNFLKDFRISQEEDS 558



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -2

Query: 344 WRARVYQLVPTPYGCSMWKGIMRDREEFSKHLKFKLGFGSRIGFWV 207
           WR +    V  PYG  +WK IM++ E   + +  K+G G+R+ FW+
Sbjct: 442 WRTKE---VCGPYGVGLWKEIMKEAEWCWESMDLKVGKGNRVLFWM 484


>emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]
          Length = 1905

 Score = 37.7 bits (86), Expect(2) = 5e-06
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 308  YGCSMWKGIMRDREEFSKHLKFKLGFGSRIGFW 210
            YG  +WK I +  E F  H +F +G G+R+ FW
Sbjct: 1602 YGVGVWKAIRKGWENFRSHSRFIIGDGTRVKFW 1634



 Score = 37.4 bits (85), Expect(2) = 5e-06
 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = -1

Query: 231  WVEDWVLGKWGQPLMEAFEVIYNVSDKKNVLVKNM*KEFNGVGSWNLWL---LNDWEV 67
            W + W      Q L EAF +++N+S  K   V    +E  G GSW L     LNDWEV
Sbjct: 1634 WKDLWC---GNQSLEEAFPILFNLSVNKEGWVAEAWEEDEGGGSWGLRFNRHLNDWEV 1688


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