BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041215
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW47301.1| ribosomal protein S1 [Eschscholzia californica]         53   6e-10
gb|ABW22416.1| S1 ribosomal protein [Phaseolus vulgaris]               54   7e-10
gb|ABW22420.1| S1 ribosomal protein [Ononis spinosa]                   53   7e-10
gb|ABW22418.1| S1 ribosomal protein [Pisum sativum]                    53   7e-10
ref|YP_005090380.1| ribosomal protein S1 (mitochondrion) [Phoeni...    49   2e-09

>gb|AAW47301.1| ribosomal protein S1 [Eschscholzia californica]
          Length = 152

 Score = 53.1 bits (126), Expect(2) = 6e-10
 Identities = 30/52 (57%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = +3

Query: 21  STARFNSLMGSTDVVVGE-LLLLPQSFRQTELDWS*KKIRRMNNKLNGFIND 173
           + ARFN+L+GSTDVV GE LLLLP+ FRQ        KI R N K+ GFI D
Sbjct: 69  AAARFNALVGSTDVVAGEPLLLLPRRFRQNRAWMELNKIWRTNTKVKGFIID 120



 Score = 35.4 bits (80), Expect(2) = 6e-10
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +1

Query: 172 IIDKLKGGYSVAITDFITF 228
           IIDK+KGGYSVAI  FITF
Sbjct: 118 IIDKVKGGYSVAIAGFITF 136


>gb|ABW22416.1| S1 ribosomal protein [Phaseolus vulgaris]
          Length = 206

 Score = 53.5 bits (127), Expect(2) = 7e-10
 Identities = 29/51 (56%), Positives = 33/51 (64%)
 Frame = +3

Query: 21  STARFNSLMGSTDVVVGELLLLPQSFRQTELDWS*KKIRRMNNKLNGFIND 173
           + ARFN L+GSTDVV GE LLLP+ FRQ        KI R N K+ GFI D
Sbjct: 104 AAARFNDLVGSTDVVAGEPLLLPRRFRQNLAWMKLNKIWRTNTKVKGFILD 154



 Score = 34.7 bits (78), Expect(2) = 7e-10
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +1

Query: 172 IIDKLKGGYSVAITDFITF 228
           I+DK+KGGYSVAI  FITF
Sbjct: 152 ILDKVKGGYSVAIAGFITF 170


>gb|ABW22420.1| S1 ribosomal protein [Ononis spinosa]
          Length = 205

 Score = 52.8 bits (125), Expect(2) = 7e-10
 Identities = 30/52 (57%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +3

Query: 21  STARFNSLMGSTDVVVGE-LLLLPQSFRQTELDWS*KKIRRMNNKLNGFIND 173
           + ARFN L+GSTDVV GE LLLLP+ FRQ        KI R N K+ GFI D
Sbjct: 104 AAARFNDLVGSTDVVAGEPLLLLPRRFRQNRAWMKLNKIWRTNTKVKGFIID 155



 Score = 35.4 bits (80), Expect(2) = 7e-10
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +1

Query: 172 IIDKLKGGYSVAITDFITF 228
           IIDK+KGGYSVAI  FITF
Sbjct: 153 IIDKVKGGYSVAIAGFITF 171


>gb|ABW22418.1| S1 ribosomal protein [Pisum sativum]
          Length = 205

 Score = 52.8 bits (125), Expect(2) = 7e-10
 Identities = 30/52 (57%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +3

Query: 21  STARFNSLMGSTDVVVGE-LLLLPQSFRQTELDWS*KKIRRMNNKLNGFIND 173
           + ARFN L+GSTDVV GE LLLLP+ FRQ        KI R N K+ GFI D
Sbjct: 104 AAARFNDLVGSTDVVAGEPLLLLPRRFRQNRAWMKLNKIWRTNTKVKGFIID 155



 Score = 35.4 bits (80), Expect(2) = 7e-10
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +1

Query: 172 IIDKLKGGYSVAITDFITF 228
           IIDK+KGGYSVAI  FITF
Sbjct: 153 IIDKVKGGYSVAIAGFITF 171


>ref|YP_005090380.1| ribosomal protein S1 (mitochondrion) [Phoenix dactylifera]
           gi|343478432|gb|AEM43920.1| ribosomal protein S1
           (mitochondrion) [Phoenix dactylifera]
          Length = 166

 Score = 48.9 bits (115), Expect(3) = 2e-09
 Identities = 26/51 (50%), Positives = 30/51 (58%)
 Frame = +3

Query: 21  STARFNSLMGSTDVVVGELLLLPQSFRQTELDWS*KKIRRMNNKLNGFIND 173
           + ARFN  +GS DV  GE LLLP+ FRQ       KKI R   K+ GFI D
Sbjct: 69  AAARFNDFVGSLDVAAGEPLLLPRRFRQNRAWMELKKIWRTKKKVKGFIID 119



 Score = 35.4 bits (80), Expect(3) = 2e-09
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +1

Query: 172 IIDKLKGGYSVAITDFITF 228
           IIDK+KGGYSVAI  FITF
Sbjct: 117 IIDKVKGGYSVAIAGFITF 135



 Score = 21.6 bits (44), Expect(3) = 2e-09
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 221 LLFLPFCPL 247
           + FLPFCPL
Sbjct: 133 ITFLPFCPL 141