BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041211
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_003532697.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11
ref|XP_002523384.1| pentatricopeptide repeat-containing protein,...    71   8e-11
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,...    71   1e-10

>ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Vitis vinifera]
          Length = 461

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/111 (59%), Positives = 85/111 (76%)
 Frame = +1

Query: 13  ISRHLQSLFQRSKTISHLLQIHSLFLKSALDHNPYPISMFISTACSISIELARSIFDHLS 192
           +SR +Q L QRSKT +HLLQ+HSL LK+A DHNP  IS FI +  S+SIE AR +FD L 
Sbjct: 1   MSRQIQILLQRSKTTTHLLQLHSLILKTAKDHNPDLISQFIFSISSVSIEFARLVFDRLP 60

Query: 193 ISPPLFAFNTIIREYAKSPHAVEAIKMFSRLRGMGIIPDKFTYPFVVKACG 345
           I  P+FA+N+IIR Y KS   +EA+K+FS+++ +G+ PD FTYPFVVKACG
Sbjct: 61  IRAPIFAWNSIIRAYTKSSVPIEAVKLFSQMQRVGLKPDNFTYPFVVKACG 111


>ref|XP_003532697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 444

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/104 (48%), Positives = 73/104 (70%)
 Frame = +1

Query: 31  SLFQRSKTISHLLQIHSLFLKSALDHNPYPISMFISTACSISIELARSIFDHLSISPPLF 210
           +L  RSKT++ LLQ+H+LFLK++LDH+P+ IS F+  + +IS+  A S F  L   PPLF
Sbjct: 5   TLIHRSKTLTQLLQLHALFLKTSLDHHPFFISQFLLQSSTISLPFAASFFHSLPTLPPLF 64

Query: 211 AFNTIIREYAKSPHAVEAIKMFSRLRGMGIIPDKFTYPFVVKAC 342
           A+NT+IR +A +P    ++ +F  L+   + PD FTYPFV+KAC
Sbjct: 65  AWNTLIRAFAATPTPFHSLTLFRLLQTSPLNPDNFTYPFVLKAC 108


>ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
 Frame = +1

Query: 31  SLFQRSKTISHLLQIHSLFLKSALDHNPYPISMFISTACSIS-IELARSI-FDHLSISPP 204
           SL     T++   QIHSL LK  L HNP  ++ F +T+   + +  A S+ F +   +PP
Sbjct: 127 SLLTTCDTLTTFTQIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPP 186

Query: 205 ----LFAFNTIIREYAKSPHAV-EAIKMFSRLRGMGIIPDKFTYPFVVKAC 342
                F FNT+IR +A++ H+   A++ ++ +R   + P+KFT+PFV+KAC
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKAC 237


>ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537334|gb|EEF38963.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 538

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = +1

Query: 34  LFQRSKTISHLLQIHSLFLKSALDHNPYPISMFISTACSISIEL-ARSIFDHLSISPPLF 210
           L      + HL Q H+  L  ALDH+   +S+FI ++ S+   L A S+F  L+  P +F
Sbjct: 17  LLNHCSNLKHLHQTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSLTHPPNIF 76

Query: 211 AFNTIIREYAKSPHAVEAIKMFSRLRGMGIIPDKFTYPFVVKA 339
            +NTIIR  + SP    +I +F+R++   + PD +++PF +KA
Sbjct: 77  LYNTIIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKA 119


>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 765

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
 Frame = +1

Query: 13  ISRHLQ--SLFQRSKTISHLLQIHSLFLKSALDHNPYPISMFISTAC---SISIELARSI 177
           ++ H Q  SL  +   + HL ++H+  L+S L  +PY  S   S A      S++ AR +
Sbjct: 28  VTSHSQTLSLIDQCTNLKHLKELHATILRSGLFFHPYNASKLFSVAALSSFSSLDYARKV 87

Query: 178 FDHLSISPPLFAFNTIIREYAKSPHAVEAIKMFSR-LRGMGIIPDKFTYPFVVKA 339
           F+ +S  P L+ +NT+IR +A SP  + ++ +F R L      P+KFT+PFV+KA
Sbjct: 88  FEEIS-QPNLYTWNTLIRAFASSPEPIHSLLIFIRMLYDSPDFPNKFTFPFVIKA 141