BLASTX nr result

ID: Cimicifuga21_contig00041161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041161
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
emb|CBI15839.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cuc...   127   1e-27
ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27

>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/90 (70%), Positives = 74/90 (82%)
 Frame = +2

Query: 2   KRLRGLGHEPHMDSVLHDINEEEKETAIRYHSEKLAVAFGLINTAEGKSIRVVKNLRACR 181
           K L+G GH P+  +VLHDI EEEKE AIRYHSE++AVAFGL++T  GK+IRVVKNLR C 
Sbjct: 479 KELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCS 538

Query: 182 DCHDFLKLLSKLFKREIIVRDRNRFHHFRD 271
           DCH  +KL+S  FKREIIVRDR RFHHFR+
Sbjct: 539 DCHSAMKLISNAFKREIIVRDRKRFHHFRN 568


>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/90 (70%), Positives = 74/90 (82%)
 Frame = +2

Query: 2   KRLRGLGHEPHMDSVLHDINEEEKETAIRYHSEKLAVAFGLINTAEGKSIRVVKNLRACR 181
           K L+G GH P+  +VLHDI EEEKE AIRYHSE++AVAFGL++T  GK+IRVVKNLR C 
Sbjct: 407 KELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCS 466

Query: 182 DCHDFLKLLSKLFKREIIVRDRNRFHHFRD 271
           DCH  +KL+S  FKREIIVRDR RFHHFR+
Sbjct: 467 DCHSAMKLISNAFKREIIVRDRKRFHHFRN 496


>ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|222858026|gb|EEE95573.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/90 (68%), Positives = 73/90 (81%)
 Frame = +2

Query: 2   KRLRGLGHEPHMDSVLHDINEEEKETAIRYHSEKLAVAFGLINTAEGKSIRVVKNLRACR 181
           K+L+  G+ P    VLH+I+EEEKETA+ YHSEKLA+AFGLI+TA G  IRVVKNLR C 
Sbjct: 607 KKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICD 666

Query: 182 DCHDFLKLLSKLFKREIIVRDRNRFHHFRD 271
           DCH   KLLSK++KR IIVRDRNRFHHFR+
Sbjct: 667 DCHTVTKLLSKIYKRVIIVRDRNRFHHFRE 696


>ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/89 (61%), Positives = 76/89 (85%)
 Frame = +2

Query: 5   RLRGLGHEPHMDSVLHDINEEEKETAIRYHSEKLAVAFGLINTAEGKSIRVVKNLRACRD 184
           +++  G++P  D V+H+I+EEEKE A+  HSEKLA+AFGLINT+EG +IR+VKNLR C D
Sbjct: 566 KMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCND 625

Query: 185 CHDFLKLLSKLFKREIIVRDRNRFHHFRD 271
           CHD +K++SK+ +REI+VRDR+RFHHF+D
Sbjct: 626 CHDAIKIISKIVEREIVVRDRSRFHHFKD 654


>ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 632

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/89 (61%), Positives = 76/89 (85%)
 Frame = +2

Query: 5   RLRGLGHEPHMDSVLHDINEEEKETAIRYHSEKLAVAFGLINTAEGKSIRVVKNLRACRD 184
           +++  G++P  D V+H+I+EEEKE A+  HSEKLA+AFGLINT+EG +IR+VKNLR C D
Sbjct: 535 KMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCND 594

Query: 185 CHDFLKLLSKLFKREIIVRDRNRFHHFRD 271
           CHD +K++SK+ +REI+VRDR+RFHHF+D
Sbjct: 595 CHDAIKIISKIVEREIVVRDRSRFHHFKD 623


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