BLASTX nr result

ID: Cimicifuga21_contig00041136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041136
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   101   7e-20
ref|XP_002864007.1| predicted protein [Arabidopsis lyrata subsp....   101   7e-20
emb|CBI19294.3| unnamed protein product [Vitis vinifera]              101   7e-20
ref|XP_003527888.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    99   4e-19
ref|XP_003615335.1| E3 ubiquitin-protein ligase HUWE1 [Medicago ...    99   4e-19

>ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Vitis vinifera]
          Length = 3750

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/76 (69%), Positives = 62/76 (81%)
 Frame = -1

Query: 232 NRIWLLAFIVLVQSKDAHDELLLLFANEPEYTRELIRIVRTEEPIDERVRTLAMLALNAQ 53
           +RI LLAFIVLVQS DAHDEL+  FANEPEYT ELIRIVR+EE +   +RTLAMLAL AQ
Sbjct: 373 SRICLLAFIVLVQSNDAHDELVSFFANEPEYTNELIRIVRSEETVPGTIRTLAMLALGAQ 432

Query: 52  LASYPATVDLKRMLSG 5
           LA+Y A+ +  R+LSG
Sbjct: 433 LAAYSASHERARILSG 448


>ref|XP_002864007.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309842|gb|EFH40266.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 3616

 Score =  101 bits (251), Expect = 7e-20
 Identities = 55/76 (72%), Positives = 60/76 (78%)
 Frame = -1

Query: 232 NRIWLLAFIVLVQSKDAHDELLLLFANEPEYTRELIRIVRTEEPIDERVRTLAMLALNAQ 53
           +RI LLAFIVLVQS DA DEL   FANEPEYT ELIRIVR+EEPI   +RTLAMLAL AQ
Sbjct: 313 SRICLLAFIVLVQSSDAQDELASFFANEPEYTNELIRIVRSEEPIPGTIRTLAMLALGAQ 372

Query: 52  LASYPATVDLKRMLSG 5
           LA Y A+ D  R+LSG
Sbjct: 373 LAVYSASHDRARILSG 388


>emb|CBI19294.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/76 (69%), Positives = 62/76 (81%)
 Frame = -1

Query: 232 NRIWLLAFIVLVQSKDAHDELLLLFANEPEYTRELIRIVRTEEPIDERVRTLAMLALNAQ 53
           +RI LLAFIVLVQS DAHDEL+  FANEPEYT ELIRIVR+EE +   +RTLAMLAL AQ
Sbjct: 268 SRICLLAFIVLVQSNDAHDELVSFFANEPEYTNELIRIVRSEETVPGTIRTLAMLALGAQ 327

Query: 52  LASYPATVDLKRMLSG 5
           LA+Y A+ +  R+LSG
Sbjct: 328 LAAYSASHERARILSG 343


>ref|XP_003527888.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3654

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 51/76 (67%), Positives = 61/76 (80%)
 Frame = -1

Query: 232 NRIWLLAFIVLVQSKDAHDELLLLFANEPEYTRELIRIVRTEEPIDERVRTLAMLALNAQ 53
           +RI LLAFIVLVQS DAHDEL+  FANEPEYT ELIR+VR+EE I   +RTL MLAL AQ
Sbjct: 312 SRICLLAFIVLVQSSDAHDELVSFFANEPEYTNELIRVVRSEETISGSIRTLVMLALGAQ 371

Query: 52  LASYPATVDLKRMLSG 5
           LA+Y ++ +  R+LSG
Sbjct: 372 LAAYTSSHERARILSG 387


>ref|XP_003615335.1| E3 ubiquitin-protein ligase HUWE1 [Medicago truncatula]
           gi|355516670|gb|AES98293.1| E3 ubiquitin-protein ligase
           HUWE1 [Medicago truncatula]
          Length = 3655

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/76 (68%), Positives = 62/76 (81%)
 Frame = -1

Query: 232 NRIWLLAFIVLVQSKDAHDELLLLFANEPEYTRELIRIVRTEEPIDERVRTLAMLALNAQ 53
           +RI LL+FIVLVQS DAHDEL+  FANEPEYT ELIRIVR+EE I   +RTLAMLAL AQ
Sbjct: 312 SRICLLSFIVLVQSGDAHDELVSFFANEPEYTNELIRIVRSEETISGSIRTLAMLALGAQ 371

Query: 52  LASYPATVDLKRMLSG 5
           LA+Y ++ +  R+LSG
Sbjct: 372 LAAYTSSHERARILSG 387


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