BLASTX nr result

ID: Cimicifuga21_contig00041111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041111
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24
ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]   113   1e-23
ref|NP_001119013.1| pentatricopeptide repeat-containing protein ...   104   7e-21
emb|CAA16708.1| putatative protein [Arabidopsis thaliana] gi|726...   104   7e-21

>ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
           gi|449516723|ref|XP_004165396.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  115 bits (289), Expect = 3e-24
 Identities = 49/73 (67%), Positives = 63/73 (86%)
 Frame = +3

Query: 3   KGQECFSLMTEVYKTSPSLEHYACMADLLGRRGKLEEALKFVQNMPMKPDAGVWGALLGA 182
           KG+ECF +MTE Y  +P L+HY+CM DLLGR+GKL EAL+ +Q+MPMKPD G+WGALLGA
Sbjct: 476 KGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGA 535

Query: 183 CKIHNNINIGKFM 221
           CKIHNN+ IG+++
Sbjct: 536 CKIHNNMEIGEYV 548


>ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial [Vitis vinifera]
           gi|296082485|emb|CBI21490.3| unnamed protein product
           [Vitis vinifera]
          Length = 637

 Score =  113 bits (283), Expect = 1e-23
 Identities = 47/71 (66%), Positives = 60/71 (84%)
 Frame = +3

Query: 3   KGQECFSLMTEVYKTSPSLEHYACMADLLGRRGKLEEALKFVQNMPMKPDAGVWGALLGA 182
           KG ECF+LMT+VYK +P L+HY+CMADLLGR+G+L+EA +F+QNMP KPD G+W  LL A
Sbjct: 478 KGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSA 537

Query: 183 CKIHNNINIGK 215
           CKIH N+ IG+
Sbjct: 538 CKIHQNVVIGE 548


>emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
          Length = 609

 Score =  113 bits (283), Expect = 1e-23
 Identities = 47/71 (66%), Positives = 60/71 (84%)
 Frame = +3

Query: 3   KGQECFSLMTEVYKTSPSLEHYACMADLLGRRGKLEEALKFVQNMPMKPDAGVWGALLGA 182
           KG ECF+LMT+VYK +P L+HY+CMADLLGR+G+L+EA +F+QNMP KPD G+W  LL A
Sbjct: 478 KGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSA 537

Query: 183 CKIHNNINIGK 215
           CKIH N+ IG+
Sbjct: 538 CKIHQNVVIGE 548


>ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g19191, mitochondrial; Flags: Precursor
           gi|332658758|gb|AEE84158.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  104 bits (260), Expect = 7e-21
 Identities = 45/71 (63%), Positives = 56/71 (78%)
 Frame = +3

Query: 3   KGQECFSLMTEVYKTSPSLEHYACMADLLGRRGKLEEALKFVQNMPMKPDAGVWGALLGA 182
           KG E F +M +VY  SP L+HY+CM DLLGR+GKLEEAL+ ++NM  KPDAG+WGALL A
Sbjct: 477 KGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536

Query: 183 CKIHNNINIGK 215
           CKIH N+ I +
Sbjct: 537 CKIHRNVKIAE 547


>emb|CAA16708.1| putatative protein [Arabidopsis thaliana] gi|7268714|emb|CAB78921.1|
            putatative protein [Arabidopsis thaliana]
          Length = 1260

 Score =  104 bits (260), Expect = 7e-21
 Identities = 45/71 (63%), Positives = 56/71 (78%)
 Frame = +3

Query: 3    KGQECFSLMTEVYKTSPSLEHYACMADLLGRRGKLEEALKFVQNMPMKPDAGVWGALLGA 182
            KG E F +M +VY  SP L+HY+CM DLLGR+GKLEEAL+ ++NM  KPDAG+WGALL A
Sbjct: 1083 KGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 1142

Query: 183  CKIHNNINIGK 215
            CKIH N+ I +
Sbjct: 1143 CKIHRNVKIAE 1153


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