BLASTX nr result

ID: Cimicifuga21_contig00041105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041105
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336388.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002308594.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
gb|ABK96434.1| unknown [Populus trichocarpa x Populus deltoides]       71   8e-11
ref|XP_002324212.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|NP_001241190.1| uncharacterized protein LOC100798895 [Glycin...    67   1e-09

>ref|XP_002336388.1| predicted protein [Populus trichocarpa] gi|222834873|gb|EEE73322.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
 Frame = +2

Query: 14  RSFSFEILGNNCGYKSYVAVWNVLPREDGEKDG-----CMIEWSYVVDPVEGWTPEELGC 178
           R  S+EIL NN G+KSYVA     P  DG++DG     C IEWS++ DP+EGW  E+   
Sbjct: 92  RCLSYEILENNAGFKSYVATMKAFPINDGDEDGDGQHGCKIEWSFIADPIEGWPLEDFNS 151

Query: 179 RQYSILKAIGKCIEEA 226
              S L+ +G+ +E+A
Sbjct: 152 YINSSLQFMGQKMEQA 167


>ref|XP_002308594.1| predicted protein [Populus trichocarpa] gi|222854570|gb|EEE92117.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
 Frame = +2

Query: 14  RSFSFEILGNNCGYKSYVAVWNVLPREDGEKDG---CMIEWSYVVDPVEGWTPEELGCRQ 184
           R  S+EIL NN G+KSYVA   V P  DG+ DG   C IEWS++ DP+EGW  E+     
Sbjct: 92  RCLSYEILENNAGFKSYVATMKVSPINDGDGDGQHGCTIEWSFIADPIEGWPLEDFNSYI 151

Query: 185 YSILKAIGKCIE 220
            S L+ +GK +E
Sbjct: 152 NSSLQFMGKKME 163


>gb|ABK96434.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 171

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
 Frame = +2

Query: 14  RSFSFEILGNNCGYKSYVAVWNVLPREDGEKDG---CMIEWSYVVDPVEGWTPEELGCRQ 184
           R  S+EIL NN G+KSYVA   V P  DG+ DG   C IEWS++ DP+EGW  E+     
Sbjct: 94  RCLSYEILENNAGFKSYVATMKVSPINDGDGDGHHGCTIEWSFIADPIEGWPLEDFNSYI 153

Query: 185 YSILKAIGKCIE 220
            S L+ +GK +E
Sbjct: 154 NSSLQFMGKKME 165


>ref|XP_002324212.1| predicted protein [Populus trichocarpa] gi|222865646|gb|EEF02777.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
 Frame = +2

Query: 2   DHTTRSFSFEILGNNCGYKSYVAVWNVLPREDGEKDGCMIEWSYVVDPVEGWTPEELGCR 181
           DH  RS S+EI+ +N G+KSYV+   V+P+ D  +DGC+IEWS+ VDPV G   +EL  R
Sbjct: 91  DHVERSLSYEIVDSNIGFKSYVSTVKVVPQGDDGQDGCVIEWSFNVDPVAGLVLDEL-VR 149

Query: 182 QYSI-LKAIGKCIEEA 226
           +Y + L+ + + +E+A
Sbjct: 150 KYKVGLQQMAERLEDA 165


>ref|NP_001241190.1| uncharacterized protein LOC100798895 [Glycine max]
           gi|255647804|gb|ACU24362.1| unknown [Glycine max]
          Length = 162

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/76 (46%), Positives = 47/76 (61%)
 Frame = +2

Query: 2   DHTTRSFSFEILGNNCGYKSYVAVWNVLPREDGEKDGCMIEWSYVVDPVEGWTPEELGCR 181
           D   R  ++E++ NN G+KSYVA   VLP E    DGC IEW +V DPVEGW+ + L   
Sbjct: 87  DPVQRCLTYEVVENNMGFKSYVATLKVLPIEG---DGCKIEWGFVSDPVEGWSCQGLKSY 143

Query: 182 QYSILKAIGKCIEEAH 229
             S L+++ K IE A+
Sbjct: 144 VESTLQSMAKKIEFAY 159


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