BLASTX nr result

ID: Cimicifuga21_contig00041014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041014
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|2235454...    68   9e-10
ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261...    58   9e-07
emb|CBI21012.3| unnamed protein product [Vitis vinifera]               58   9e-07

>ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|222855587|gb|EEE93134.1|
           predicted protein [Populus trichocarpa]
          Length = 847

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 44/86 (51%), Positives = 55/86 (63%)
 Frame = -1

Query: 279 VSQPQIMHKCARSSPLGSICHYGSLSTPLSQLGKGKFSWKPDSDGGFYDILEDDTPEMLR 100
           VSQP++    AR S   S+  Y S  TP+++LG+ K +   DSD G YDILEDDTPE+L+
Sbjct: 719 VSQPRVYPGSARLSSGSSLHWYSSPITPMTRLGETK-NQAQDSDCGLYDILEDDTPEILK 777

Query: 99  EPPTTSKSVKAISPNKKRVCSPGSLI 22
           +      SVKA SPNKKRV  P S I
Sbjct: 778 DSSAPITSVKASSPNKKRVSPPHSHI 803


>ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|223545491|gb|EEF46996.1| tso1,
           putative [Ricinus communis]
          Length = 873

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/65 (55%), Positives = 45/65 (69%)
 Frame = -1

Query: 228 SICHYGSLSTPLSQLGKGKFSWKPDSDGGFYDILEDDTPEMLREPPTTSKSVKAISPNKK 49
           S+  + S  TP+++LG+ K     DSD G Y+ILEDDTPE+L+E  T S SVKA SPNKK
Sbjct: 762 SVRWWNSPITPMTRLGENKIQGH-DSDSGLYNILEDDTPEILKEGSTPSASVKASSPNKK 820

Query: 48  RVCSP 34
           RV  P
Sbjct: 821 RVSPP 825


>ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|222866282|gb|EEF03413.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 279 VSQPQIMHKCARSSPLGSICHYGSLSTPLSQLGKGKFSWKPDSDGGFYDILEDDTPEMLR 100
           +SQ  +     R S  GS+    S  TP+++LG+ K +   DS  G YDILED TPE+ +
Sbjct: 14  ISQVCLYPGSGRLSSSGSLQWRSSPITPMTRLGETK-TQALDSGCGLYDILEDGTPEIFK 72

Query: 99  EPPTTSKSVKAISPNKKRVCSP 34
           E PT   SVKA SP+KKRV  P
Sbjct: 73  ESPTPVTSVKASSPHKKRVSPP 94


>ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261127 [Vitis vinifera]
          Length = 1001

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = -1

Query: 231  GSICHYGSLSTPLSQLGKGKFSWKPDSDGGFYDILEDDTPEMLREPPTTSKSVKAISPNK 52
            GS+    S   P +QLG+ K     +SD   YDILEDDTP +L++  T +K+VKA SP +
Sbjct: 879  GSLRWRSSPIPPSTQLGETKIFQGLESDNELYDILEDDTPTILKDASTPTKAVKASSPKQ 938

Query: 51   KRVCSP 34
            KRV  P
Sbjct: 939  KRVSPP 944


>emb|CBI21012.3| unnamed protein product [Vitis vinifera]
          Length = 1094

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = -1

Query: 231  GSICHYGSLSTPLSQLGKGKFSWKPDSDGGFYDILEDDTPEMLREPPTTSKSVKAISPNK 52
            GS+    S   P +QLG+ K     +SD   YDILEDDTP +L++  T +K+VKA SP +
Sbjct: 866  GSLRWRSSPIPPSTQLGETKIFQGLESDNELYDILEDDTPTILKDASTPTKAVKASSPKQ 925

Query: 51   KRVCSP 34
            KRV  P
Sbjct: 926  KRVSPP 931


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