BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040998
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319048.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_002328376.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat...   140   9e-32
ref|XP_002328356.1| predicted protein [Populus trichocarpa] gi|2...   140   9e-32
ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat...   140   1e-31

>ref|XP_002319048.1| predicted protein [Populus trichocarpa] gi|222857424|gb|EEE94971.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/174 (40%), Positives = 107/174 (61%)
 Frame = +2

Query: 2   MGYGFGAVTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDD 181
           MGY    +TY TII GL +  ++  A+ LL++ME++ C P+V++YSTIID  CK+KL+ +
Sbjct: 76  MGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITE 135

Query: 182 GLKLLSEMIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLID 361
            ++ LSEM+ +G+SPN VTY+S++   CNLGR NEAT    +MV R +  D + +N+L+D
Sbjct: 136 AMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVD 195

Query: 362 GHCXXXXXXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTML 523
           G                MI KG  P    Y  L+ G+C + QM++A K+   M+
Sbjct: 196 GLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMV 249



 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 54/172 (31%), Positives = 84/172 (48%)
 Frame = +2

Query: 5   GYGFGAVTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDG 184
           G     VTY +I+ G      S++A  L ++M +    PD + ++ ++DG  KE ++ + 
Sbjct: 147 GISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEA 206

Query: 185 LKLLSEMIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDG 364
             +   MIEKGV PN  TY +L+   C+  +++EA    + MV +G +  V  YN+LI G
Sbjct: 207 QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKG 266

Query: 365 HCXXXXXXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTM 520
           HC              M  K   P T  Y  L+ G C  G+  DA K+ + M
Sbjct: 267 HCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM 318



 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/167 (29%), Positives = 79/167 (47%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           VTY T++ G  +      A  LL EM      PD++ YS ++DG CK+  +D+  +LL  
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXX 382
           M E  + PN   YT LI  MCN G++  A      +  +G+  DV+ Y ++I G      
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGL 412

Query: 383 XXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTML 523
                     M + G  P +  Y  ++ G    G  ++AG++ + M+
Sbjct: 413 SNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMV 459



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/165 (29%), Positives = 83/165 (50%)
 Frame = +2

Query: 26  TYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEM 205
           +Y  +I G  ++    +A GLL EM  +  TPD + YST++ GFC++    D  KLL EM
Sbjct: 259 SYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM 318

Query: 206 IEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXXX 385
              G+ P+ +TY+ ++  +C  G ++EA   L  M    +  ++ +Y +LI G C     
Sbjct: 319 RSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKL 378

Query: 386 XXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTM 520
                    + +KG +P    Y  +++G    G  N+A ++ + M
Sbjct: 379 EAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDM 423



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/161 (30%), Positives = 80/161 (49%)
 Frame = +2

Query: 26  TYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEM 205
           TY  ++ G        +A  L   M ++ C P V  Y+ +I G CK   +D+   LL+EM
Sbjct: 224 TYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEM 283

Query: 206 IEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXXX 385
             K ++P++VTY++L+   C  GR  +A   L+EM + GL  D++ Y++++DG C     
Sbjct: 284 SHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHL 343

Query: 386 XXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKI 508
                    M      P  FIY  L+ G C  G++  A ++
Sbjct: 344 DEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAREL 384



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/151 (27%), Positives = 75/151 (49%)
 Frame = +2

Query: 71  HKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEMIEKGVSPNSVTYTSL 250
           H A  +L  M K    P+ + +ST+++G   +  + D +KL  EM++ G  P+ +TY+++
Sbjct: 29  HFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTI 88

Query: 251 IFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXXXXXXXXXXXMMILKGE 430
           I  +C +G    A   L +M  +G   +V++Y+ +ID  C              M+ +G 
Sbjct: 89  INGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGI 148

Query: 431 RPKTFIYYKLVTGHCLKGQMNDAGKICKTML 523
            P    Y  ++ G C  G+ N+A  + K M+
Sbjct: 149 SPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 35/148 (23%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           +TY  ++ GL +  +  +A  LL+ M++ K  P++ IY+ +I G C    ++   +L S 
Sbjct: 328 MTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN 387

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEAT-----------------------GFL---- 301
           +  KG+ P+ VTYT +I  +   G  NEA                        GFL    
Sbjct: 388 LFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGD 447

Query: 302 --------DEMVARGLSVDVILYNMLID 361
                   +EMV RG S D   + ML D
Sbjct: 448 TSNAGRLIEEMVGRGFSADSSTFQMLSD 475


>ref|XP_002328376.1| predicted protein [Populus trichocarpa] gi|222838091|gb|EEE76456.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/173 (37%), Positives = 107/173 (61%)
 Frame = +2

Query: 5   GYGFGAVTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDG 184
           G+    ++Y T+I GL ++ N+  AL LLR+ME++ C P+++ Y+TIID  CK+ LV+D 
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251

Query: 185 LKLLSEMIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDG 364
           + LLSEM+++G+ P+ VTY++++   C+LG +NEAT   +EMV R +  + + + +L+DG
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311

Query: 365 HCXXXXXXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTML 523
            C              M  KG  P  + Y  L+ G+CL  QM++A K+   M+
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMV 364



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/166 (32%), Positives = 85/166 (51%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           V Y TII  L +    + A+ LL EM      PDV+ YSTI+ GFC    +++   L +E
Sbjct: 233 VAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNE 292

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXX 382
           M+ + V PN+VT+T L+  +C  G V+EA    + M  +G   +   YN L+DG+C    
Sbjct: 293 MVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQ 352

Query: 383 XXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTM 520
                    +M+ KG  P    Y  L+ G+C + ++++A  +   M
Sbjct: 353 MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEM 398



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/163 (30%), Positives = 82/163 (50%)
 Frame = +2

Query: 20  AVTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLS 199
           A TY  ++ G        +A  +L  M  + C P V  Y+ +I+G+CK + +D+   LL 
Sbjct: 337 AYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLV 396

Query: 200 EMIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXX 379
           EM EK ++P++VTY++L+  +C +GR  EA     EM + GL  D++ Y+ L+DG C   
Sbjct: 397 EMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHG 456

Query: 380 XXXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKI 508
                      M      P   +Y  L+ G  + G++  A ++
Sbjct: 457 HLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/166 (28%), Positives = 79/166 (47%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           VT+  ++ GL +     +A  +   M K+   P+   Y+ ++DG+C    +D+  K+L  
Sbjct: 303 VTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXX 382
           M++KG +P   +Y  LI   C   R++EA   L EM  + L+ D + Y+ L+ G C    
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR 422

Query: 383 XXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTM 520
                     M   G  P    Y  L+ G C  G +++A K+ K+M
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSM 468



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 40/114 (35%), Positives = 61/114 (53%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           VTY T++ GL +     +AL L +EM      PD++ YST++DG CK   +D+ LKLL  
Sbjct: 408 VTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKS 467

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDG 364
           M E  + P+ V Y  LI  M   G++  A     ++ A G+   +  Y ++I G
Sbjct: 468 MQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKG 521



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 35/196 (17%)
 Frame = +2

Query: 38  IITGLSRTRNSHKALGLLREMEKEKCTPDVIIY--------------------------- 136
           +I  L R  +   A+ +L +M K    PD I +                           
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 137 --------STIIDGFCKEKLVDDGLKLLSEMIEKGVSPNSVTYTSLIFCMCNLGRVNEAT 292
                   ST+I+G CK       L+LL +M EKG  PN V YT++I  +C    VN+A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 293 GFLDEMVARGLSVDVILYNMLIDGHCXXXXXXXXXXXXXMMILKGERPKTFIYYKLVTGH 472
             L EMV RG+  DV+ Y+ ++ G C              M+ +   P T  +  LV G 
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 473 CLKGQMNDAGKICKTM 520
           C +G +++A  + + M
Sbjct: 313 CKEGMVSEARCVFEAM 328



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/167 (25%), Positives = 78/167 (46%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           V +G  +  +++ +     + L  +M+    T +V   + +I+  C+   V   + +L +
Sbjct: 93  VEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGK 152

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXX 382
           M + G+ P+++T+ +LI   C  G + EA G  +EMV RG   DVI Y+ +I+G C    
Sbjct: 153 MFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGN 212

Query: 383 XXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTML 523
                     M  KG +P    Y  ++   C    +NDA  +   M+
Sbjct: 213 TSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV 259



 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 33/114 (28%), Positives = 61/114 (53%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           +TY T++ GL +  +  +AL LL+ M++ K  PD+++Y+ +I+G      ++   +L S+
Sbjct: 443 MTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSK 502

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDG 364
           +   G+ P   TYT +I  +   G  +EA     +M   G   +   YN++I G
Sbjct: 503 LFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQG 556



 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 38/148 (25%), Positives = 62/148 (41%)
 Frame = +2

Query: 77  ALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEMIEKGVSPNSVTYTSLIF 256
           AL     M +    P V+ +   +    K+K     + L ++M   GV+ N  +   LI 
Sbjct: 76  ALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILIN 135

Query: 257 CMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXXXXXXXXXXXMMILKGERP 436
           C+C L  V  A   L +M   G+  D I +N LI+G C              M+ +G +P
Sbjct: 136 CLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQP 195

Query: 437 KTFIYYKLVTGHCLKGQMNDAGKICKTM 520
               Y  ++ G C  G  + A ++ + M
Sbjct: 196 DVISYSTVINGLCKSGNTSMALQLLRKM 223


>ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  140 bits (354), Expect = 9e-32
 Identities = 73/174 (41%), Positives = 101/174 (58%)
 Frame = +2

Query: 2   MGYGFGAVTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDD 181
           M Y     TYG +I GL +T ++  A+G LR+ME+    P+V++YSTI+DG CK+ LV +
Sbjct: 176 MWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSE 235

Query: 182 GLKLLSEMIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLID 361
            L L SEM  KGV PN VTY  LI  +CN GR  EA   LDEM+  G+  D+ + N+L+D
Sbjct: 236 ALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVD 295

Query: 362 GHCXXXXXXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTML 523
             C              MIL GE P  F Y  L+  +CL+ +MN+A ++   M+
Sbjct: 296 AFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMV 349



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 49/155 (31%), Positives = 69/155 (44%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           VTY  +I GL       +A  LL EM K    PD+ + + ++D FCKE  V     ++  
Sbjct: 253 VTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGF 312

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXX 382
           MI  G  P+  TY SLI   C   ++NEA      MV+RG   D++++  LI G C    
Sbjct: 313 MILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKN 372

Query: 383 XXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQ 487
                     M   G  P    +  L+ G C  G+
Sbjct: 373 INKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGR 407



 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 43/159 (27%), Positives = 77/159 (48%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           V + ++I G  + +N +KA+ LL EM K    PDV  ++T+I GFC+        +L   
Sbjct: 358 VVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLN 417

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXX 382
           M + G  PN  T   ++  +C    ++EA      M    L +++++Y++L+DG C    
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGK 477

Query: 383 XXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDA 499
                     +  KG +   +IY  ++ G C +G ++ A
Sbjct: 478 LNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKA 516



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/163 (26%), Positives = 70/163 (42%)
 Frame = +2

Query: 2   MGYGFGAVTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDD 181
           MG+     T+ T+I G  +      A  L   M K    P++   + I+DG CKE L+ +
Sbjct: 386 MGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSE 445

Query: 182 GLKLLSEMIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLID 361
            + L   M +  +  N V Y+ L+  MC+ G++N A      +  +GL ++V +Y ++I 
Sbjct: 446 AVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIK 505

Query: 362 GHCXXXXXXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQM 490
           G C              M   G  P    Y   V G   K ++
Sbjct: 506 GLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEI 548


>ref|XP_002328356.1| predicted protein [Populus trichocarpa] gi|222838071|gb|EEE76436.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score =  140 bits (354), Expect = 9e-32
 Identities = 66/173 (38%), Positives = 104/173 (60%)
 Frame = +2

Query: 5   GYGFGAVTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDG 184
           G+    ++Y T+I GL +T N+  A+ + ++ME+  C P+V+ YSTIID  CK++LV+D 
Sbjct: 193 GHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDA 252

Query: 185 LKLLSEMIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDG 364
           ++ LSEM+E+G+ PN  TY S++   CNLG++NEAT    EMV R +  + + + +L+DG
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312

Query: 365 HCXXXXXXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTML 523
            C              M  KG  P    Y  L+ G+CL+  MN+A K+ + M+
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMI 365



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/162 (28%), Positives = 83/162 (51%)
 Frame = +2

Query: 38  IITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEMIEKG 217
           +I  L R  +   ++ +L +M K    PD I ++ +I+G C E  + + ++L +EM+++G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 218 VSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXXXXXXX 397
             PN ++YT++I  +C  G  + A     +M   G   +V+ Y+ +ID  C         
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 398 XXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTML 523
                M+ +G  P  F Y  +V G C  GQ+N+A ++ K M+
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMV 295



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/166 (28%), Positives = 82/166 (49%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           VT+  ++ GL +     +A  +   M ++   PD+  Y+ ++DG+C ++L+++  K+   
Sbjct: 304 VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXX 382
           MI KG +P + +Y  LI   C   R++EA   L EM  + L+ D + Y+ L+ G C    
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423

Query: 383 XXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTM 520
                     M   G  P    Y  L+ G C  G +++A K+ K+M
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSM 469



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 48/165 (29%), Positives = 77/165 (46%)
 Frame = +2

Query: 26  TYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEM 205
           TY +I+ G       ++A  L +EM      P+ + ++ ++DG CKE +V +   +   M
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329

Query: 206 IEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXXX 385
            EKGV P+  TY +L+   C    +NEA    + M+ +G +     YN+LI+G+C     
Sbjct: 330 TEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRM 389

Query: 386 XXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTM 520
                    M  K   P T  Y  L+ G C  G+  +A  + K M
Sbjct: 390 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM 434



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 46/161 (28%), Positives = 81/161 (50%)
 Frame = +2

Query: 26  TYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEM 205
           TY  ++ G    R  ++A  +   M ++ C P    Y+ +I+G+CK + +D+   LL+EM
Sbjct: 340 TYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEM 399

Query: 206 IEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXXX 385
             K ++P++VTY++L+  +C LGR  EA     EM + G   +++ Y +L+DG C     
Sbjct: 400 YHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHL 459

Query: 386 XXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKI 508
                    M  K   P    Y  L+ G  + G++  A ++
Sbjct: 460 DEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKEL 500



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 48/168 (28%), Positives = 76/168 (45%)
 Frame = +2

Query: 17  GAVTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLL 196
           GA +Y  +I G  ++R   +A  LL EM  +   PD + YST++ G C+     + L L 
Sbjct: 372 GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLF 431

Query: 197 SEMIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXX 376
            EM   G  PN VTY  L+   C  G ++EA   L  M  + L  +++ Y +LI+G    
Sbjct: 432 KEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIA 491

Query: 377 XXXXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTM 520
                       +   G RP    Y  ++ G   +G  ++A  + + M
Sbjct: 492 GKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKM 539



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 42/167 (25%), Positives = 79/167 (47%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           V +G  +   ++ +     + L  +M+  + T +V   + +I+  C+   VD  + +L +
Sbjct: 94  VEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGK 153

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXX 382
           M + G+ P+++T+ +LI  +CN G++ EA    +EMV RG   +VI Y  +I+G C    
Sbjct: 154 MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGN 213

Query: 383 XXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTML 523
                     M   G +P    Y  ++   C    +NDA +    M+
Sbjct: 214 TSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/148 (25%), Positives = 61/148 (41%)
 Frame = +2

Query: 77  ALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEMIEKGVSPNSVTYTSLIF 256
           AL     M +    P V+ +   +  F K+K     + L ++M    V+ N  +   LI 
Sbjct: 77  ALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILIN 136

Query: 257 CMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXXXXXXXXXXXMMILKGERP 436
           C+C L  V+ +   L +M   G+  D I +N LI+G C              M+ +G  P
Sbjct: 137 CLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEP 196

Query: 437 KTFIYYKLVTGHCLKGQMNDAGKICKTM 520
               Y  ++ G C  G  + A  + K M
Sbjct: 197 NVISYTTVINGLCKTGNTSMAVDVFKKM 224


>ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/176 (38%), Positives = 106/176 (60%), Gaps = 2/176 (1%)
 Frame = +2

Query: 2   MGYGF--GAVTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLV 175
           +G GF    VTYGT+I GL +  N++ A+ LLR ME+  C PDV++Y++IID  CK++ V
Sbjct: 166 IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 225

Query: 176 DDGLKLLSEMIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNML 355
            +   L S+M+ +G+SP+  TYTSLI  +CNL      T  L++M+   +  DV++++ +
Sbjct: 226 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 285

Query: 356 IDGHCXXXXXXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTML 523
           +D  C             MMI++G  P    Y  L+ GHCL+ +M++A K+  TM+
Sbjct: 286 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV 341



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 52/158 (32%), Positives = 76/158 (48%)
 Frame = +2

Query: 26  TYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEM 205
           TY ++I  L           LL +M   K  PDV+I+ST++D  CKE  + +   ++  M
Sbjct: 246 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 305

Query: 206 IEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXXX 385
           I +GV PN VTY +L+   C    ++EA    D MV  G + +VI YN LI+G+C     
Sbjct: 306 IIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 365

Query: 386 XXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDA 499
                    M  K   P T + Y  +   C  G++ DA
Sbjct: 366 DKATYLFEEMCQKELIPNT-VTYNTLMHXCHVGRLQDA 402



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/172 (26%), Positives = 80/172 (46%)
 Frame = +2

Query: 5   GYGFGAVTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDG 184
           GY    ++Y T+I G  + +   KA  L  EM +++  P+ + Y+T++   C    + D 
Sbjct: 344 GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDA 402

Query: 185 LKLLSEMIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDG 364
           + L  EM+  G  P+  TY  L+  +C    ++EA   L  +    +  D+ +Y ++IDG
Sbjct: 403 IALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDG 462

Query: 365 HCXXXXXXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTM 520
            C              +  KG RP    Y  ++ G C +G +++A K+   M
Sbjct: 463 MCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 514



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/133 (31%), Positives = 60/133 (45%)
 Frame = +2

Query: 77  ALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEMIEKGVSPNSVTYTSLIF 256
           A  +L ++ K    PD   ++T+I G C E  + D L L  +MI +G  PN VTY +LI 
Sbjct: 123 AFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLIN 182

Query: 257 CMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXXXXXXXXXXXMMILKGERP 436
            +C +G  N A   L  M       DV++Y  +ID  C              M+ +G  P
Sbjct: 183 GLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 242

Query: 437 KTFIYYKLVTGHC 475
             F Y  L+   C
Sbjct: 243 DIFTYTSLIHSLC 255



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/166 (24%), Positives = 80/166 (48%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           V + T++  L +     +A  ++  M      P+V+ Y+ ++DG C +  +D+ +K+   
Sbjct: 280 VIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDT 339

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXX 382
           M+  G +PN ++Y +LI   C + R+++AT   +EM  + L  + + YN L+   C    
Sbjct: 340 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGR 398

Query: 383 XXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTM 520
                     M+  G+ P    Y  L+   C K  +++A  + KT+
Sbjct: 399 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTI 444



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/167 (22%), Positives = 77/167 (46%)
 Frame = +2

Query: 23  VTYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSE 202
           V +  ++T +++T+       L  +M+     PDV   + +I+ FC    +     +L++
Sbjct: 70  VDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAK 129

Query: 203 MIEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHCXXXX 382
           +++ G  P++ T+T+LI  +C  G++ +A    D+M+  G   +V+ Y  LI+G C    
Sbjct: 130 ILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 189

Query: 383 XXXXXXXXXMMILKGERPKTFIYYKLVTGHCLKGQMNDAGKICKTML 523
                     M     +P   +Y  ++   C   Q+ +A  +   M+
Sbjct: 190 TNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 236



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/113 (31%), Positives = 58/113 (51%)
 Frame = +2

Query: 26  TYGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEM 205
           TY  ++  L +  +  +A+ LL+ +E     PD+ IY+ +IDG C+   ++    + S +
Sbjct: 420 TYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNL 479

Query: 206 IEKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDG 364
             KG+ PN  TYT +I  +C  G ++EA     EM   G S D   YN +  G
Sbjct: 480 SSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQG 532



 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 34/114 (29%), Positives = 54/114 (47%)
 Frame = +2

Query: 29  YGTIITGLSRTRNSHKALGLLREMEKEKCTPDVIIYSTIIDGFCKEKLVDDGLKLLSEMI 208
           Y  +I G+ R      A  +   +  +   P+V  Y+ +I+G C+  L+D+  KL  EM 
Sbjct: 456 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 515

Query: 209 EKGVSPNSVTYTSLIFCMCNLGRVNEATGFLDEMVARGLSVDVILYNMLIDGHC 370
             G SP+  TY ++   +        A   L EM+ARG S DV    +L++  C
Sbjct: 516 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569