BLASTX nr result
ID: Cimicifuga21_contig00040970
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00040970
(343 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi... 160 8e-38
emb|CBI30210.3| unnamed protein product [Vitis vinifera] 160 8e-38
emb|CAN82063.1| hypothetical protein VITISV_016431 [Vitis vinifera] 155 3e-36
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi... 150 1e-34
ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containi... 150 1e-34
>ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 160 bits (406), Expect = 8e-38
Identities = 76/114 (66%), Positives = 95/114 (83%)
Frame = +1
Query: 1 LSSPDVVSYTTMMSAYAKSNREDEAVKLFFGMRRSDIEPNEFSFVAILTVCIRLFDLKLG 180
LS P+VVSYT M+S +AKSNRE +A+++FF MR S IE NEFSFVAILTVCIRL DL+LG
Sbjct: 131 LSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELG 190
Query: 181 SQIHALVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
Q+HA+V+K + ++T+V NALMG Y KCG L+SV+QLF+EMP RD+ SWNTVI
Sbjct: 191 CQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVI 244
Score = 71.6 bits (174), Expect = 6e-11
Identities = 39/110 (35%), Positives = 63/110 (57%)
Frame = +1
Query: 13 DVVSYTTMMSAYAKSNREDEAVKLFFGMRRSDIEPNEFSFVAILTVCIRLFDLKLGSQIH 192
D+ S+ T++S+ K + A +LF MRR D + ++ + V R +G +IH
Sbjct: 236 DIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMVGREIH 295
Query: 193 ALVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
A V+K + S V NAL+ FY KCG ++ V+ LFE+M RD+++W +I
Sbjct: 296 AHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMI 345
Score = 68.2 bits (165), Expect = 7e-10
Identities = 35/109 (32%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = +1
Query: 19 VSYTTMMSAYAKSNREDEAVKLFFGMR-RSDIEPNEFSFVAILTVCIRLFDLKLGSQIHA 195
+ +T+M+ YA++ + +EA+ LF + + ++ + A+L VC L ++G QIH
Sbjct: 473 IIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHC 532
Query: 196 LVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
+KS + S V N+++ Y+KC ++ I++F MP D+VSWN +I
Sbjct: 533 HALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLI 581
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Frame = +1
Query: 19 VSYTTMMSAYAKSNREDEAVKLFFGMRRSDIEPNEFSFVAILTVCIRLFDLKLGSQIHAL 198
+SY ++S + ++ +A+ F M +E +F+ +L C L + K+ QIH
Sbjct: 370 ISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGF 429
Query: 199 VVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEE--MPQRDLVSWNTVI 342
++K + S + AL+ +CGR+ ++F + Q + W ++I
Sbjct: 430 ILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMI 479
>emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 160 bits (406), Expect = 8e-38
Identities = 76/114 (66%), Positives = 95/114 (83%)
Frame = +1
Query: 1 LSSPDVVSYTTMMSAYAKSNREDEAVKLFFGMRRSDIEPNEFSFVAILTVCIRLFDLKLG 180
LS P+VVSYT M+S +AKSNRE +A+++FF MR S IE NEFSFVAILTVCIRL DL+LG
Sbjct: 149 LSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELG 208
Query: 181 SQIHALVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
Q+HA+V+K + ++T+V NALMG Y KCG L+SV+QLF+EMP RD+ SWNTVI
Sbjct: 209 CQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVI 262
Score = 71.6 bits (174), Expect = 6e-11
Identities = 39/110 (35%), Positives = 63/110 (57%)
Frame = +1
Query: 13 DVVSYTTMMSAYAKSNREDEAVKLFFGMRRSDIEPNEFSFVAILTVCIRLFDLKLGSQIH 192
D+ S+ T++S+ K + A +LF MRR D + ++ + V R +G +IH
Sbjct: 254 DIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMVGREIH 313
Query: 193 ALVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
A V+K + S V NAL+ FY KCG ++ V+ LFE+M RD+++W +I
Sbjct: 314 AHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMI 363
Score = 68.2 bits (165), Expect = 7e-10
Identities = 35/109 (32%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = +1
Query: 19 VSYTTMMSAYAKSNREDEAVKLFFGMR-RSDIEPNEFSFVAILTVCIRLFDLKLGSQIHA 195
+ +T+M+ YA++ + +EA+ LF + + ++ + A+L VC L ++G QIH
Sbjct: 491 IIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHC 550
Query: 196 LVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
+KS + S V N+++ Y+KC ++ I++F MP D+VSWN +I
Sbjct: 551 HALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLI 599
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Frame = +1
Query: 19 VSYTTMMSAYAKSNREDEAVKLFFGMRRSDIEPNEFSFVAILTVCIRLFDLKLGSQIHAL 198
+SY ++S + ++ +A+ F M +E +F+ +L C L + K+ QIH
Sbjct: 388 ISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGF 447
Query: 199 VVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEE--MPQRDLVSWNTVI 342
++K + S + AL+ +CGR+ ++F + Q + W ++I
Sbjct: 448 ILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMI 497
>emb|CAN82063.1| hypothetical protein VITISV_016431 [Vitis vinifera]
Length = 755
Score = 155 bits (393), Expect = 3e-36
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +1
Query: 1 LSSPDVVSYTTMMSAYAKSNREDEAVKLFFGMRRSDIEPNEFSFVAILTVCIRLFDLKLG 180
LS P+VVSYT M+S +AKSNRE +A+++FF MR S IE NEFSFVAILTVCIRL DL+LG
Sbjct: 133 LSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELG 192
Query: 181 SQIHALVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
Q+HA+V+K + ++T+V NALMG Y KCG L+ V+QLF+EM RD+ SWNTVI
Sbjct: 193 CQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDXVLQLFDEMXHRDIASWNTVI 246
Score = 66.2 bits (160), Expect = 3e-09
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = +1
Query: 19 VSYTTMMSAYAKSNREDEAVKLFFGMR-RSDIEPNEFSFVAILTVCIRLFDLKLGSQIHA 195
+ +T+M+ YA++ + +EA+ LF + + + + A+L VC L ++G QIH
Sbjct: 406 IIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDXVASTAVLGVCGTLAFHEMGKQIHC 465
Query: 196 LVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
+KS + S V N+++ Y+KC + I++F MP D+VSWN +I
Sbjct: 466 HALKSGFLSDLGVGNSIITMYSKCSNMXDAIKVFNVMPAHDIVSWNGLI 514
>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 150 bits (379), Expect = 1e-34
Identities = 71/114 (62%), Positives = 90/114 (78%)
Frame = +1
Query: 1 LSSPDVVSYTTMMSAYAKSNREDEAVKLFFGMRRSDIEPNEFSFVAILTVCIRLFDLKLG 180
LS P+VVSYT ++S ++KS+ EDEAV+LFF M S IEPNE++FVAILT CIR D +LG
Sbjct: 156 LSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLG 215
Query: 181 SQIHALVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
SQ+H +VVK S ++CNALMG Y KCG L+ V++LFEEMP+RD+ SWNTVI
Sbjct: 216 SQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVI 269
Score = 76.6 bits (187), Expect = 2e-12
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +1
Query: 13 DVVSYTTMMSAYAKSNREDEAVKLFFGMRR-SDIEPNEFSFVAILTVCIRLFDLKLGSQI 189
D+ S+ T++S+ K + DEA F GM+ ++ + FS +LT C G Q+
Sbjct: 261 DITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQL 320
Query: 190 HALVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
HAL +K S V ++L+GFY KCG V LFE MP RD+++W +I
Sbjct: 321 HALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMI 371
Score = 65.1 bits (157), Expect = 6e-09
Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +1
Query: 28 TTMMSAYAKSNREDEAVKLFF-GMRRSDIEPNEFSFVAILTVCIRLFDLKLGSQIHALVV 204
T+M+ YA++ + +EA+ LF G I +E +IL++C + ++G Q+H +
Sbjct: 502 TSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHAL 561
Query: 205 KSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
KS + T V NA + Y+KC ++ +++F M +D+VSWN ++
Sbjct: 562 KSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLV 607
>ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 150 bits (379), Expect = 1e-34
Identities = 71/114 (62%), Positives = 90/114 (78%)
Frame = +1
Query: 1 LSSPDVVSYTTMMSAYAKSNREDEAVKLFFGMRRSDIEPNEFSFVAILTVCIRLFDLKLG 180
LS P+VVSYT ++S ++KS+ EDEAV+LFF M S IEPNE++FVAILT CIR D +LG
Sbjct: 156 LSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLG 215
Query: 181 SQIHALVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
SQ+H +VVK S ++CNALMG Y KCG L+ V++LFEEMP+RD+ SWNTVI
Sbjct: 216 SQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVI 269
Score = 76.6 bits (187), Expect = 2e-12
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +1
Query: 13 DVVSYTTMMSAYAKSNREDEAVKLFFGMRR-SDIEPNEFSFVAILTVCIRLFDLKLGSQI 189
D+ S+ T++S+ K + DEA F GM+ ++ + FS +LT C G Q+
Sbjct: 261 DITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQL 320
Query: 190 HALVVKSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
HAL +K S V ++L+GFY KCG V LFE MP RD+++W +I
Sbjct: 321 HALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMI 371
Score = 65.5 bits (158), Expect = 4e-09
Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +1
Query: 28 TTMMSAYAKSNREDEAVKLFF-GMRRSDIEPNEFSFVAILTVCIRLFDLKLGSQIHALVV 204
T+M+ YA++ + +EA+ LF G I +E +IL++C + ++G Q+H +
Sbjct: 502 TSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHAL 561
Query: 205 KSDYCSFTYVCNALMGFYAKCGRLESVIQLFEEMPQRDLVSWNTVI 342
KS + T V NA + Y+KC ++ +++F M +D+VSWN ++
Sbjct: 562 KSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLV 607