BLASTX nr result

ID: Cimicifuga21_contig00040958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040958
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325094.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_003549512.1| PREDICTED: uncharacterized protein LOC100814...   104   9e-21
ref|NP_001242533.1| uncharacterized protein LOC100807586 [Glycin...   101   6e-20
emb|CBI36614.3| unnamed protein product [Vitis vinifera]              101   7e-20
emb|CAN81813.1| hypothetical protein VITISV_020894 [Vitis vinifera]   100   2e-19

>ref|XP_002325094.1| predicted protein [Populus trichocarpa] gi|222866528|gb|EEF03659.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/110 (49%), Positives = 74/110 (67%), Gaps = 11/110 (10%)
 Frame = +2

Query: 5   IQVLHSVPQGRAVVLQEH-VTKIANEVKAP--LPMEKSSNME-----VPPWKGKDVQSWI 160
           +Q L    Q + ++L ++ + K+  +V  P    M+KS  M+     +PPWK  D++SWI
Sbjct: 29  VQALQPDLQNQPIILLDNPIKKLDCDVMKPPFSKMDKSVKMDDAFKSLPPWKSNDMKSWI 88

Query: 161 WLQQAMHPEVNYNSCFRKKWLQ--FPWK-LTQFKSIPIKKWFKEMKQKRK 301
           W+QQAMHPE+NYNSCFRKKW+   FPWK +  FK+I IKKW KE+K KRK
Sbjct: 89  WMQQAMHPELNYNSCFRKKWVHNLFPWKNILPFKTISIKKWLKEIKLKRK 138


>ref|XP_003549512.1| PREDICTED: uncharacterized protein LOC100814258 [Glycine max]
          Length = 384

 Score =  104 bits (259), Expect = 9e-21
 Identities = 55/109 (50%), Positives = 70/109 (64%), Gaps = 10/109 (9%)
 Frame = +2

Query: 5   IQVLHSVPQGRAVVLQEHVTKIANEVK---APLPMEKSSNME------VPPWKGKDVQSW 157
           +Q L   PQ  +VVL ++ +    E     AP  MEKS  M+       P WK  +V+SW
Sbjct: 29  VQALQPEPQHGSVVLLDNNSMKQLEPSSPNAPPSMEKSDRMDGADFGSFPAWKSNNVKSW 88

Query: 158 IWLQQAMHPEVNYNSCFRKKWLQFPWK-LTQFKSIPIKKWFKEMKQKRK 301
           IW+QQAMHPE+NYNSCFRKKW+  PWK +   K++ IKKWFKE+K KRK
Sbjct: 89  IWMQQAMHPELNYNSCFRKKWM--PWKQIIPLKNVSIKKWFKEIKMKRK 135


>ref|NP_001242533.1| uncharacterized protein LOC100807586 [Glycine max]
           gi|255642022|gb|ACU21278.1| unknown [Glycine max]
          Length = 387

 Score =  101 bits (252), Expect = 6e-20
 Identities = 54/109 (49%), Positives = 71/109 (65%), Gaps = 10/109 (9%)
 Frame = +2

Query: 5   IQVLHSVPQGRAVVLQEHVTKIANEVKAPLP---MEKSSNME------VPPWKGKDVQSW 157
           +Q L   PQ  +VVL ++ +    E  +P P   MEKS+ M+       P WK  +V+SW
Sbjct: 29  VQALQPEPQHGSVVLLDNNSMKQLEPGSPNPLPSMEKSARMDGAHFGSFPAWKSNNVKSW 88

Query: 158 IWLQQAMHPEVNYNSCFRKKWLQFPWK-LTQFKSIPIKKWFKEMKQKRK 301
           IW+QQAMHPE+NYNS FRKKW+  PWK +   K++ IKKWFKE+K KRK
Sbjct: 89  IWMQQAMHPELNYNSYFRKKWM--PWKQIIPLKNVSIKKWFKEIKMKRK 135


>emb|CBI36614.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/95 (53%), Positives = 63/95 (66%), Gaps = 8/95 (8%)
 Frame = +2

Query: 41  VVLQEHVTKIANEVKAPLP-MEKSSNME------VPPWKGKDVQSWIWLQQAMHPEVNYN 199
           V+L   + K  N+ KAP P M+ S  M+       PPWK  DV+SWIW+QQAMHPE+NYN
Sbjct: 42  VILDNPIKKFGNDTKAPFPKMDNSVKMDDAGIKSPPPWKTNDVKSWIWMQQAMHPELNYN 101

Query: 200 SCFRKKWLQFPWKLTQFKS-IPIKKWFKEMKQKRK 301
           S FRKKW+   WK+    S I IKKWFK++K KRK
Sbjct: 102 SYFRKKWIS--WKIMPLGSNISIKKWFKDIKLKRK 134


>emb|CAN81813.1| hypothetical protein VITISV_020894 [Vitis vinifera]
          Length = 417

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/95 (51%), Positives = 61/95 (64%), Gaps = 8/95 (8%)
 Frame = +2

Query: 41  VVLQEHVTKIANEVKAPLP-------MEKSSNMEVPPWKGKDVQSWIWLQQAMHPEVNYN 199
           V+L   + K  N+ KAP P       M+ +     PPWK  DV+SWIW+QQAMHPE+NYN
Sbjct: 67  VILDNPIKKFGNDTKAPFPKIDNSVKMDDAGIKSPPPWKTNDVKSWIWMQQAMHPELNYN 126

Query: 200 SCFRKKWLQFPWKLTQFKS-IPIKKWFKEMKQKRK 301
           S FRKKW+   WK+    S I IKKWFK++K KRK
Sbjct: 127 SHFRKKWIS--WKIMPLGSNISIKKWFKDIKLKRK 159


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