BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040957
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   135   3e-30
ref|XP_002517352.1| zinc finger protein, putative [Ricinus commu...   121   7e-26
gb|AFK38839.1| unknown [Lotus japonicus]                              119   3e-25
ref|XP_002511421.1| conserved hypothetical protein [Ricinus comm...   118   6e-25
ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like...   116   2e-24

>ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Vitis vinifera]
          Length = 188

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/89 (68%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
 Frame = +1

Query: 4   GFNTGNTVERSNNICNRMSHADIEKLPCFDFKAGEKGSS-PLDCVVCLENFRMGDKCRVL 180
           GF  G  VER N     MS  D++KLPCF F+A EKGSS P+DC VCL+NF+MGDKCR+L
Sbjct: 32  GFGNGRMVERGNPRSTSMSLDDLDKLPCFHFQAKEKGSSSPVDCAVCLDNFKMGDKCRLL 91

Query: 181 PICKHSFHAQCVDSWLLKSAICPICRTNA 267
           P+C HSFHAQCVDSWLLK+ ICPICRT+A
Sbjct: 92  PLCNHSFHAQCVDSWLLKTPICPICRTSA 120


>ref|XP_002517352.1| zinc finger protein, putative [Ricinus communis]
           gi|223543363|gb|EEF44894.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 200

 Score =  121 bits (303), Expect = 7e-26
 Identities = 53/71 (74%), Positives = 60/71 (84%)
 Frame = +1

Query: 55  MSHADIEKLPCFDFKAGEKGSSPLDCVVCLENFRMGDKCRVLPICKHSFHAQCVDSWLLK 234
           +S  D+EKLP FDF A  KGSSP+DC VCL+NFR GDKCR+LPICKHSFHAQCVD WLLK
Sbjct: 51  ISADDLEKLPSFDFIAKGKGSSPVDCAVCLDNFRAGDKCRLLPICKHSFHAQCVDEWLLK 110

Query: 235 SAICPICRTNA 267
           + ICPICR +A
Sbjct: 111 TPICPICRASA 121


>gb|AFK38839.1| unknown [Lotus japonicus]
          Length = 188

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/89 (59%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
 Frame = +1

Query: 4   GFNTGNTVERSNNICNRMSHADIEKLPCFDFKAGEKGS-SPLDCVVCLENFRMGDKCRVL 180
           G + G+  ER  N    MS  D+EKLPC+D+ A +  + SP+DC VCLEN   GDKCR+L
Sbjct: 47  GGSGGSMTERGANGGRSMSKKDLEKLPCYDYVAKDNSTCSPVDCAVCLENLTTGDKCRLL 106

Query: 181 PICKHSFHAQCVDSWLLKSAICPICRTNA 267
           P+CKHSFHAQCVD+WLLK+ ICPICR++A
Sbjct: 107 PVCKHSFHAQCVDTWLLKTPICPICRSSA 135


>ref|XP_002511421.1| conserved hypothetical protein [Ricinus communis]
           gi|223550536|gb|EEF52023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/93 (56%), Positives = 69/93 (74%), Gaps = 6/93 (6%)
 Frame = +1

Query: 1   RGFNTGNTV-----ERSNNICNRMSHADIEKLPCFDFKAGEK-GSSPLDCVVCLENFRMG 162
           RG+ TG  +       S     ++S+ +++ LPCFD+KA EK GSS  DCVVCLENF +G
Sbjct: 33  RGYETGQEIGPGSFSSSRYGIKKISNEELKNLPCFDYKAAEKEGSSSSDCVVCLENFNVG 92

Query: 163 DKCRVLPICKHSFHAQCVDSWLLKSAICPICRT 261
           DKC++LP CKHSFH+QC+DSWL+K+ ICPICRT
Sbjct: 93  DKCKLLPNCKHSFHSQCIDSWLVKTPICPICRT 125


>ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 146

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/93 (59%), Positives = 69/93 (74%), Gaps = 3/93 (3%)
 Frame = +1

Query: 1   RGFNTGNTVERSNNICNRMSHADIEKLPCFDFKAG--EKGS-SPLDCVVCLENFRMGDKC 171
           R +  G  V+R  +    MS  +++KLPCF++KA   EK S SP+DC VCLENFR GDKC
Sbjct: 31  RAYGNGAMVQRGGSGGLGMSQDELKKLPCFEYKAVALEKASNSPVDCAVCLENFRKGDKC 90

Query: 172 RVLPICKHSFHAQCVDSWLLKSAICPICRTNAT 270
           R+LP CKH FH+QC+DSWLLK+ ICPICRT A+
Sbjct: 91  RLLPNCKHFFHSQCIDSWLLKTPICPICRTCAS 123