BLASTX nr result

ID: Cimicifuga21_contig00040956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040956
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279279.1| PREDICTED: myb-related protein B [Vitis vini...    80   2e-13
ref|XP_003533306.1| PREDICTED: transcription factor WER-like [Gl...    70   2e-10
ref|XP_002318324.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_003548323.1| PREDICTED: transcriptional activator Myb-lik...    69   4e-10
ref|XP_002530307.1| r2r3-myb transcription factor, putative [Ric...    67   1e-09

>ref|XP_002279279.1| PREDICTED: myb-related protein B [Vitis vinifera]
           gi|297734369|emb|CBI15616.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/65 (60%), Positives = 49/65 (75%)
 Frame = +2

Query: 5   CPNGFGDKNDPVELYDFLQVNTDSNRSEVINHARNEEDEVEQGARKNANHESSIPFIDFL 184
           C     D+  PVE YDFL VNTDSNRSEVI+HAR +++EVEQ A  + + ++ +PFIDFL
Sbjct: 157 CTKMLEDRTQPVEFYDFLNVNTDSNRSEVIDHARRDDEEVEQEAMDHQS-KAGVPFIDFL 215

Query: 185 SVGSS 199
           SVGSS
Sbjct: 216 SVGSS 220


>ref|XP_003533306.1| PREDICTED: transcription factor WER-like [Glycine max]
          Length = 237

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +2

Query: 23  DKNDPVELYDFLQVNTDSNRSEVINHARNEEDEVEQGARKNANHESSIPFIDFLSVG 193
           D  + VE YDFLQVNTDSN+SEV ++AR +E+EV Q A    N ++ +PFIDFLS G
Sbjct: 179 DNCESVEFYDFLQVNTDSNKSEVTDNARRDEEEVSQDAVGMKNKDNGVPFIDFLSTG 235


>ref|XP_002318324.1| predicted protein [Populus trichocarpa] gi|222858997|gb|EEE96544.1|
           predicted protein [Populus trichocarpa]
           gi|225626259|gb|ACN97179.1| MYB transcription factor
           [Populus trichocarpa]
          Length = 243

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/62 (53%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
 Frame = +2

Query: 8   PNGFGDKNDPVELYDFLQVNTDSNRSEVINHARNEEDEV-EQGARKNANHESSIPFIDFL 184
           P+   D++ P+E YDFLQVNTDSN+SEVI++AR +++EV +Q A +N   ++ +PFIDF 
Sbjct: 176 PSHCEDQSRPIEFYDFLQVNTDSNKSEVIDNARRDDEEVDQQEALENNQSKADVPFIDFF 235

Query: 185 SV 190
           SV
Sbjct: 236 SV 237


>ref|XP_003548323.1| PREDICTED: transcriptional activator Myb-like [Glycine max]
          Length = 234

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/56 (57%), Positives = 41/56 (73%)
 Frame = +2

Query: 26  KNDPVELYDFLQVNTDSNRSEVINHARNEEDEVEQGARKNANHESSIPFIDFLSVG 193
           K+  VE YDFLQVNTDSN SEV ++AR +++EV Q A    N ++ +PFIDFLS G
Sbjct: 177 KSQSVEFYDFLQVNTDSNESEVTDNARRDDEEVSQDAVGQKNKDNGVPFIDFLSTG 232


>ref|XP_002530307.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223530163|gb|EEF32074.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 176

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/58 (56%), Positives = 45/58 (77%)
 Frame = +2

Query: 26  KNDPVELYDFLQVNTDSNRSEVINHARNEEDEVEQGARKNANHESSIPFIDFLSVGSS 199
           K  PVE YDFLQVNTDS++SEVI++AR +++EV+Q  ++ A     + FIDFLSVG+S
Sbjct: 120 KKQPVEFYDFLQVNTDSSKSEVIDNARRDDEEVDQEQKRKA----GLAFIDFLSVGNS 173


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