BLASTX nr result

ID: Cimicifuga21_contig00040941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040941
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73385.1| hypothetical protein VITISV_006444 [Vitis vinifera]    42   6e-08
emb|CAN62411.1| hypothetical protein VITISV_029284 [Vitis vinifera]    42   1e-07
emb|CAN77641.1| hypothetical protein VITISV_007623 [Vitis vinifera]    41   2e-07
emb|CAN78795.1| hypothetical protein VITISV_011028 [Vitis vinifera]    40   2e-07
emb|CAN72221.1| hypothetical protein VITISV_028928 [Vitis vinifera]    42   2e-07

>emb|CAN73385.1| hypothetical protein VITISV_006444 [Vitis vinifera]
          Length = 722

 Score = 41.6 bits (96), Expect(2) = 6e-08
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +2

Query: 5   RHLGQGDPLSPLLFILVAEMLGRMITRFNSMGVL 106
           R LGQGDPLSP LF +VA++L RM+ +     VL
Sbjct: 432 RGLGQGDPLSPFLFTIVADVLSRMLLKAKERNVL 465



 Score = 40.0 bits (92), Expect(2) = 6e-08
 Identities = 22/43 (51%), Positives = 26/43 (60%)
 Frame = +3

Query: 108 ESFRVGIDNILISHLQFADDTVFFSLEESFEQRMWLRGSLGCF 236
           E FRVG +   +SHLQFADDT+FFS     E  M L+  L  F
Sbjct: 466 EGFRVGRNRSRVSHLQFADDTIFFSSSRE-EDMMTLKNVLLVF 507


>emb|CAN62411.1| hypothetical protein VITISV_029284 [Vitis vinifera]
          Length = 817

 Score = 41.6 bits (96), Expect(2) = 1e-07
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +3

Query: 108 ESFRVGIDNILISHLQFADDTVFFS 182
           E FRVG + I +SHLQFADDT+FFS
Sbjct: 249 EGFRVGRNRIRVSHLQFADDTIFFS 273



 Score = 38.9 bits (89), Expect(2) = 1e-07
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = +2

Query: 5   RHLGQGDPLSPLLFILVAEMLGRMITRFNSMGVL 106
           R L QGDPLSP LF LVA++L RM+ R      L
Sbjct: 215 RGLRQGDPLSPFLFTLVADVLSRMLLRAEERNAL 248


>emb|CAN77641.1| hypothetical protein VITISV_007623 [Vitis vinifera]
          Length = 1284

 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 20/40 (50%), Positives = 25/40 (62%)
 Frame = +3

Query: 108 ESFRVGIDNILISHLQFADDTVFFSLEESFEQRMWLRGSL 227
           E FRVG +   +SHLQFADDT+FFS     E+ +    SL
Sbjct: 732 EGFRVGRNRTRVSHLQFADDTIFFSNSREEEEELQTLKSL 771



 Score = 38.9 bits (89), Expect(2) = 2e-07
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +2

Query: 5   RHLGQGDPLSPLLFILVAEMLGRMITR 85
           R L QGDPLSP LF LVA++L RM+ R
Sbjct: 698 RGLXQGDPLSPFLFTLVADVLSRMLMR 724


>emb|CAN78795.1| hypothetical protein VITISV_011028 [Vitis vinifera]
          Length = 1072

 Score = 40.0 bits (92), Expect(2) = 2e-07
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +2

Query: 5    RHLGQGDPLSPLLFILVAEMLGRMITRFNSMGVL 106
            R L QGDPLSP LF +VA++L RM+ R +   VL
Sbjct: 926  RGLRQGDPLSPFLFTIVADVLSRMLLRADERNVL 959



 Score = 40.0 bits (92), Expect(2) = 2e-07
 Identities = 22/43 (51%), Positives = 26/43 (60%)
 Frame = +3

Query: 108  ESFRVGIDNILISHLQFADDTVFFSLEESFEQRMWLRGSLGCF 236
            E FRVG +   +SHLQFADDT+FFS     E  M L+  L  F
Sbjct: 960  EGFRVGRNRTRVSHLQFADDTIFFSSTRE-EDMMTLKNVLLVF 1001


>emb|CAN72221.1| hypothetical protein VITISV_028928 [Vitis vinifera]
          Length = 312

 Score = 41.6 bits (96), Expect(2) = 2e-07
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +2

Query: 5   RHLGQGDPLSPLLFILVAEMLGRMITRFNSMGVL 106
           R L QGDPLSP LF LVA++L RM+ R N   +L
Sbjct: 26  RGLRQGDPLSPFLFTLVADVLSRMLLRANERNML 59



 Score = 38.5 bits (88), Expect(2) = 2e-07
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 108 ESFRVGIDNILISHLQFADDTVFFS 182
           E F+VG +   +SHLQFADDT+FFS
Sbjct: 60  EGFKVGRNKTRVSHLQFADDTIFFS 84


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