BLASTX nr result

ID: Cimicifuga21_contig00040920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040920
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001764456.1| predicted protein [Physcomitrella patens sub...    70   2e-10
ref|XP_002993364.1| hypothetical protein SELMODRAFT_45794 [Selag...    64   1e-08
ref|XP_002972750.1| hypothetical protein SELMODRAFT_413328 [Sela...    64   1e-08
ref|XP_004152346.1| PREDICTED: palmitoyl-monogalactosyldiacylgly...    62   5e-08
ref|XP_004152343.1| PREDICTED: palmitoyl-monogalactosyldiacylgly...    60   2e-07

>ref|XP_001764456.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162684320|gb|EDQ70723.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 292

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 29/62 (46%), Positives = 44/62 (70%)
 Frame = -1

Query: 187 DGVVQCEKRVTWVRKWGMRDIFYASFLVCVHGLCLFAPSTFSWSSLGVGFTLYILTGVFG 8
           D VV+  +     R+W  +D+ YA F++ +HGLCLFAP+TFSW ++GV   LY++TG+ G
Sbjct: 6   DVVVKRRRNYFKNRQWTSKDLTYAGFMIFMHGLCLFAPATFSWEAVGVFMGLYVITGMLG 65

Query: 7   VT 2
           +T
Sbjct: 66  IT 67


>ref|XP_002993364.1| hypothetical protein SELMODRAFT_45794 [Selaginella moellendorffii]
           gi|300138795|gb|EFJ05549.1| hypothetical protein
           SELMODRAFT_45794 [Selaginella moellendorffii]
          Length = 293

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 26/49 (53%), Positives = 32/49 (65%)
 Frame = -1

Query: 148 RKWGMRDIFYASFLVCVHGLCLFAPSTFSWSSLGVGFTLYILTGVFGVT 2
           RKWG RD  +  FL  VHG CL AP TF+W + G    LY+ TG+FG+T
Sbjct: 21  RKWGSRDCIHLGFLALVHGFCLLAPFTFTWGAFGSFVALYVTTGLFGIT 69


>ref|XP_002972750.1| hypothetical protein SELMODRAFT_413328 [Selaginella moellendorffii]
           gi|300159351|gb|EFJ25971.1| hypothetical protein
           SELMODRAFT_413328 [Selaginella moellendorffii]
          Length = 297

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/49 (53%), Positives = 32/49 (65%)
 Frame = -1

Query: 148 RKWGMRDIFYASFLVCVHGLCLFAPSTFSWSSLGVGFTLYILTGVFGVT 2
           RKWG RD  +  FL  VHG CL AP TF+W + G    LY+ TG+FG+T
Sbjct: 25  RKWGSRDCIHLGFLALVHGFCLLAPFTFTWGAFGSFAALYVTTGLFGIT 73


>ref|XP_004152346.1| PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic-like [Cucumis sativus]
           gi|449515927|ref|XP_004164999.1| PREDICTED:
           palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic-like [Cucumis sativus]
          Length = 380

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = -1

Query: 187 DGVVQCEKRVTWVRKWGMRDIFYASFLVCVHGLCLFAPSTFSWSSLGVGFTLYILTGVFG 8
           D VV+  + V W RKW   DI  A  +V  H L LFAP  F+W++  V  +LYI+TG+FG
Sbjct: 91  DVVVKRRREVFWGRKWNSLDIGTAGVVVATHLLTLFAPFQFNWAAFWVAISLYIITGLFG 150

Query: 7   VT 2
           +T
Sbjct: 151 IT 152


>ref|XP_004152343.1| PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic-like [Cucumis sativus]
           gi|449515933|ref|XP_004165002.1| PREDICTED:
           palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic-like [Cucumis sativus]
          Length = 317

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/77 (41%), Positives = 44/77 (57%)
 Frame = -1

Query: 232 GRLMTDTKEEKTPSFDGVVQCEKRVTWVRKWGMRDIFYASFLVCVHGLCLFAPSTFSWSS 53
           G L+ DT +E++     V Q        RKW   D   AS ++  H LC+FAP  F+WS+
Sbjct: 10  GSLLMDTLKEESKKMGKVHQM---TFGRRKWTNGDKLKASLILSFHVLCIFAPFHFNWSA 66

Query: 52  LGVGFTLYILTGVFGVT 2
             V F LYILTG+FG++
Sbjct: 67  FWVAFVLYILTGLFGIS 83


Top