BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040919
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                61   8e-08
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    61   8e-08
emb|CCH50954.1| T1.2 [Malus x robusta]                                 59   3e-07
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    59   5e-07
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          55   6e-06

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/48 (68%), Positives = 36/48 (75%), Gaps = 4/48 (8%)
 Frame = +2

Query: 224 VLSIYKNKGDVQNCGN*RGIKLTSHMMKL----IEQRLRKEFSVSDNQ 355
           ++ IYKNKGDVQNC N RGIKL SH MKL    IE RLR+E  VSDNQ
Sbjct: 621 LVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQ 668


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/48 (68%), Positives = 36/48 (75%), Gaps = 4/48 (8%)
 Frame = +2

Query: 224 VLSIYKNKGDVQNCGN*RGIKLTSHMMKL----IEQRLRKEFSVSDNQ 355
           ++ IYKNKGDVQNC N RGIKL SH MKL    IE RLR+E  VSDNQ
Sbjct: 225 LVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQ 272


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 4/48 (8%)
 Frame = +2

Query: 224 VLSIYKNKGDVQNCGN*RGIKLTSHMMKL----IEQRLRKEFSVSDNQ 355
           ++ IYKNKGD+QNC N RGIKL SH MKL    IE RLR++  VSDNQ
Sbjct: 244 LVPIYKNKGDIQNCMNYRGIKLMSHTMKLLARVIEHRLRQKTRVSDNQ 291


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 4/51 (7%)
 Frame = +2

Query: 215 RCLVLSIYKNKGDVQNCGN*RGIKLTSHMMKL----IEQRLRKEFSVSDNQ 355
           R  ++ I KNKGD+QNC N RGIKL SH MKL    I++RLRKE  V+DNQ
Sbjct: 200 RSTLIPIDKNKGDIQNCANYRGIKLMSHTMKLWERVIKRRLRKETLVTDNQ 250


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 4/48 (8%)
 Frame = +2

Query: 224 VLSIYKNKGDVQNCGN*RGIKLTSHMMKL----IEQRLRKEFSVSDNQ 355
           ++ IYKNKGD+Q+C N RGIKL +H MKL    IE+ LRKE  V++NQ
Sbjct: 115 LVPIYKNKGDIQSCENYRGIKLMTHTMKLWERVIERGLRKETQVTENQ 162