BLASTX nr result

ID: Cimicifuga21_contig00040914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040914
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   226   1e-57
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   226   2e-57
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              226   2e-57
ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|2...   221   5e-56
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-55

>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  226 bits (576), Expect = 1e-57
 Identities = 110/128 (85%), Positives = 117/128 (91%)
 Frame = +1

Query: 1   DFCFLVKWVGQSSWHRALELYEWLNLRHWYSPNARMLATILSVLGKANQEKLAVEIFTRA 180
           DFCF+VKWVGQSSW RALE+YEWLNLRHWYSPNARMLATILSVLGKANQE LAVEIF RA
Sbjct: 187 DFCFVVKWVGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFARA 246

Query: 181 EPGVENTVQVYNAMMGVYSRNGRFSKVQELLELMRSRGCEPDLVSFNTLINARAKSGTML 360
           E    NTVQVYNAMMGVY+R GRF+KVQELL+LMRSRGCEPDLVSFNTLINAR KSGTM+
Sbjct: 247 EAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMV 306

Query: 361 PGMAIELL 384
             +AIELL
Sbjct: 307 TNLAIELL 314


>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  226 bits (575), Expect = 2e-57
 Identities = 110/128 (85%), Positives = 117/128 (91%)
 Frame = +1

Query: 1   DFCFLVKWVGQSSWHRALELYEWLNLRHWYSPNARMLATILSVLGKANQEKLAVEIFTRA 180
           DFCF+VKWVGQSSW RALE+YEWLNLRHWYSPNARMLATILSVLGKANQE LAVEIF RA
Sbjct: 155 DFCFVVKWVGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFARA 214

Query: 181 EPGVENTVQVYNAMMGVYSRNGRFSKVQELLELMRSRGCEPDLVSFNTLINARAKSGTML 360
           E    NTVQVYNAMMGVY+R GRF+KVQELL+LMRSRGCEPDLVSFNTLINAR KSGTM+
Sbjct: 215 EAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMV 274

Query: 361 PGMAIELL 384
             +AIELL
Sbjct: 275 TNLAIELL 282


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  226 bits (575), Expect = 2e-57
 Identities = 110/128 (85%), Positives = 117/128 (91%)
 Frame = +1

Query: 1   DFCFLVKWVGQSSWHRALELYEWLNLRHWYSPNARMLATILSVLGKANQEKLAVEIFTRA 180
           DFCF+VKWVGQSSW RALE+YEWLNLRHWYSPNARMLATILSVLGKANQE LAVEIF RA
Sbjct: 130 DFCFVVKWVGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFARA 189

Query: 181 EPGVENTVQVYNAMMGVYSRNGRFSKVQELLELMRSRGCEPDLVSFNTLINARAKSGTML 360
           E    NTVQVYNAMMGVY+R GRF+KVQELL+LMRSRGCEPDLVSFNTLINAR KSGTM+
Sbjct: 190 EAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMV 249

Query: 361 PGMAIELL 384
             +AIELL
Sbjct: 250 TNLAIELL 257


>ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|222837354|gb|EEE75733.1|
           predicted protein [Populus trichocarpa]
          Length = 1450

 Score =  221 bits (563), Expect = 5e-56
 Identities = 104/128 (81%), Positives = 117/128 (91%)
 Frame = +1

Query: 1   DFCFLVKWVGQSSWHRALELYEWLNLRHWYSPNARMLATILSVLGKANQEKLAVEIFTRA 180
           DFCF+VK VGQ SWHRA E+YEWLNLRHWYSPNARML+TIL+VLGKANQE LAVE+FTRA
Sbjct: 189 DFCFVVKSVGQESWHRAFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEPLAVEVFTRA 248

Query: 181 EPGVENTVQVYNAMMGVYSRNGRFSKVQELLELMRSRGCEPDLVSFNTLINARAKSGTML 360
           EP VENTV+VYNAMMGVY+R+G+F+KVQEL +LMR RGCEPDLVSFNTLINAR K+G M 
Sbjct: 249 EPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMT 308

Query: 361 PGMAIELL 384
           P +AIELL
Sbjct: 309 PNLAIELL 316


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
           predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  219 bits (557), Expect = 2e-55
 Identities = 104/128 (81%), Positives = 115/128 (89%)
 Frame = +1

Query: 1   DFCFLVKWVGQSSWHRALELYEWLNLRHWYSPNARMLATILSVLGKANQEKLAVEIFTRA 180
           D CF+VK VGQ SWHRALE+YEWLNLRHWYSPNARML+TILSVLGKANQE LAVE+F RA
Sbjct: 187 DLCFVVKSVGQESWHRALEVYEWLNLRHWYSPNARMLSTILSVLGKANQEALAVEVFMRA 246

Query: 181 EPGVENTVQVYNAMMGVYSRNGRFSKVQELLELMRSRGCEPDLVSFNTLINARAKSGTML 360
           EP   NTVQVYNAMMGVY+R GRF+KVQELL+LMR RGC+PDLVSFNTLINAR K+G M+
Sbjct: 247 EPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMM 306

Query: 361 PGMAIELL 384
           P +AIELL
Sbjct: 307 PNLAIELL 314


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