BLASTX nr result

ID: Cimicifuga21_contig00040895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040895
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14884.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002511265.1| nucleic acid binding protein, putative [Rici...   148   4e-34
gb|ADN33973.1| nucleic acid binding protein [Cucumis melo subsp....   148   5e-34
ref|XP_004157814.1| PREDICTED: LOW QUALITY PROTEIN: lysine-speci...   147   7e-34
ref|XP_004152585.1| PREDICTED: lysine-specific demethylase REF6-...   147   7e-34

>emb|CBI14884.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score =  162 bits (409), Expect = 3e-38
 Identities = 80/118 (67%), Positives = 89/118 (75%), Gaps = 10/118 (8%)
 Frame = +1

Query: 1    GGPSTRLRRRPPKPVEEEKAR----KQTRNKKGKK-PLPNISNDVNN-----EDAEFHCD 150
            GGPSTRLRRR PKP +E +A+    KQT  KK KK P      + NN     E+ E+ CD
Sbjct: 777  GGPSTRLRRRNPKPPKELEAKPVVKKQTARKKAKKAPAAKAPGNHNNAKIQDEEEEYQCD 836

Query: 151  LDGCSMGFSSKQELMLHKKNICSVKGCGKKFFSHKYLVQHRRVHIDDRPLKCPWKGCK 324
            ++GC+M FSSK EL LHKKNIC VKGCGKKFFSHKYLVQHRRVHIDDRPLKCPWKGCK
Sbjct: 837  MEGCTMSFSSKPELALHKKNICPVKGCGKKFFSHKYLVQHRRVHIDDRPLKCPWKGCK 894


>ref|XP_002511265.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223550380|gb|EEF51867.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 1736

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/117 (57%), Positives = 85/117 (72%), Gaps = 9/117 (7%)
 Frame = +1

Query: 1    GGPSTRLRRRPPKPVEEEKARKQTRNKKGKKPLPNISNDVN---------NEDAEFHCDL 153
            GGPSTRLR+RP K  +E + + + + +  KK +   ++ V          +EDAE+ CD+
Sbjct: 1565 GGPSTRLRKRPSKASKESETKLKEKLQSNKKKVRGSASAVKRASGQKNNKDEDAEYQCDI 1624

Query: 154  DGCSMGFSSKQELMLHKKNICSVKGCGKKFFSHKYLVQHRRVHIDDRPLKCPWKGCK 324
            +GC+M F SKQEL +HK+NIC VKGCGK F SHKYLVQHRRVH+DDRPLKCPWKGCK
Sbjct: 1625 EGCTMSFGSKQELAVHKRNICPVKGCGKTFLSHKYLVQHRRVHLDDRPLKCPWKGCK 1681


>gb|ADN33973.1| nucleic acid binding protein [Cucumis melo subsp. melo]
          Length = 1126

 Score =  148 bits (373), Expect = 5e-34
 Identities = 67/118 (56%), Positives = 85/118 (72%), Gaps = 10/118 (8%)
 Frame = +1

Query: 1    GGPSTRLRRRPPKPVEEEKARKQTRNKKGKK----------PLPNISNDVNNEDAEFHCD 150
            GGPSTRLR+R PKP +  +A+ + +    KK          P  +  +   +E++E+ CD
Sbjct: 954  GGPSTRLRKRTPKPTQLSEAKVKDKKPVAKKKMKTGSSLKTPAGHRDSKARDEESEYLCD 1013

Query: 151  LDGCSMGFSSKQELMLHKKNICSVKGCGKKFFSHKYLVQHRRVHIDDRPLKCPWKGCK 324
            ++GC+M F +KQEL LHK+NIC VKGC KKFFSHKYLVQHRRVH+DDRPLKCPWKGCK
Sbjct: 1014 IEGCNMSFGTKQELALHKRNICPVKGCVKKFFSHKYLVQHRRVHMDDRPLKCPWKGCK 1071


>ref|XP_004157814.1| PREDICTED: LOW QUALITY PROTEIN: lysine-specific demethylase REF6-like
            [Cucumis sativus]
          Length = 1576

 Score =  147 bits (372), Expect = 7e-34
 Identities = 67/118 (56%), Positives = 85/118 (72%), Gaps = 10/118 (8%)
 Frame = +1

Query: 1    GGPSTRLRRRPPKPVEEEKARKQTRNKKGKK----------PLPNISNDVNNEDAEFHCD 150
            GGPSTRLR+R PKP +  +A+ + +    KK          P  +  +   +E++E+ CD
Sbjct: 1404 GGPSTRLRKRTPKPTKLSEAKVKDKKPVAKKKMKTGSSLKTPAGHRDSKARDEESEYLCD 1463

Query: 151  LDGCSMGFSSKQELMLHKKNICSVKGCGKKFFSHKYLVQHRRVHIDDRPLKCPWKGCK 324
            ++GC+M F +KQEL LHK+NIC VKGC KKFFSHKYLVQHRRVH+DDRPLKCPWKGCK
Sbjct: 1464 IEGCNMSFGTKQELALHKRNICPVKGCVKKFFSHKYLVQHRRVHMDDRPLKCPWKGCK 1521


>ref|XP_004152585.1| PREDICTED: lysine-specific demethylase REF6-like [Cucumis sativus]
          Length = 1576

 Score =  147 bits (372), Expect = 7e-34
 Identities = 67/118 (56%), Positives = 85/118 (72%), Gaps = 10/118 (8%)
 Frame = +1

Query: 1    GGPSTRLRRRPPKPVEEEKARKQTRNKKGKK----------PLPNISNDVNNEDAEFHCD 150
            GGPSTRLR+R PKP +  +A+ + +    KK          P  +  +   +E++E+ CD
Sbjct: 1404 GGPSTRLRKRTPKPTKLSEAKVKDKKPVAKKKMKTGSSLKTPAGHRDSKARDEESEYLCD 1463

Query: 151  LDGCSMGFSSKQELMLHKKNICSVKGCGKKFFSHKYLVQHRRVHIDDRPLKCPWKGCK 324
            ++GC+M F +KQEL LHK+NIC VKGC KKFFSHKYLVQHRRVH+DDRPLKCPWKGCK
Sbjct: 1464 IEGCNMSFGTKQELALHKRNICPVKGCVKKFFSHKYLVQHRRVHMDDRPLKCPWKGCK 1521


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