BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040883
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
emb|CBI36131.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat...    92   4e-17
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ...    92   6e-17

>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/68 (79%), Positives = 60/68 (88%)
 Frame = +3

Query: 3   KSGSVWLARSLFDRLTEKRLVSWNAMISGYAMHGHATEALALFEEMNKEEAPPDHITFVG 182
           K GSV +AR+LF+RL  KR+VSWNAMI+GYAMHGHATEAL LFEEMN+  A PDHITFVG
Sbjct: 324 KCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNR-VAKPDHITFVG 382

Query: 183 VLSACSHG 206
           VLSACSHG
Sbjct: 383 VLSACSHG 390


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = +3

Query: 3   KSGSVWLARSLFDRLTEKRLVSWNAMISGYAMHGHATEALALFEEMNKEEAPPDHITFVG 182
           KSGSV +ARSLF+ L EKR+VSWNAMI+GYAMHGHA EAL LF+EM K +  PDHITFVG
Sbjct: 250 KSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVG 308

Query: 183 VLSACSHG 206
           VL+ACSHG
Sbjct: 309 VLAACSHG 316


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/71 (69%), Positives = 56/71 (78%), Gaps = 3/71 (4%)
 Frame = +3

Query: 3   KSGSVWLARSLFDRLTEKR---LVSWNAMISGYAMHGHATEALALFEEMNKEEAPPDHIT 173
           K G V  AR +FD++  +    +VSWNAMI+GYAMHGHATEAL LFEEMN+  A PDHIT
Sbjct: 223 KCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNR-VAKPDHIT 281

Query: 174 FVGVLSACSHG 206
           FVGVLSACSHG
Sbjct: 282 FVGVLSACSHG 292


>ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/68 (70%), Positives = 54/68 (79%)
 Frame = +3

Query: 3   KSGSVWLARSLFDRLTEKRLVSWNAMISGYAMHGHATEALALFEEMNKEEAPPDHITFVG 182
           K GSV +A  LF+RL EKR+VSWNA+I+GYAMHG A EAL LFE M K EA PDHITFVG
Sbjct: 307 KCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHITFVG 365

Query: 183 VLSACSHG 206
            L+ACS G
Sbjct: 366 ALAACSRG 373


>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486783|gb|AES67986.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/68 (67%), Positives = 56/68 (82%)
 Frame = +3

Query: 3   KSGSVWLARSLFDRLTEKRLVSWNAMISGYAMHGHATEALALFEEMNKEEAPPDHITFVG 182
           K GSV +A +LF+RL EKR+VSWNA+I+GYAMHG A  AL LF++M KE+  PDHITFVG
Sbjct: 296 KCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDR-PDHITFVG 354

Query: 183 VLSACSHG 206
           VL+ACS G
Sbjct: 355 VLAACSRG 362