BLASTX nr result

ID: Cimicifuga21_contig00040871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040871
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588806.1| hypothetical protein MTR_1g013430 [Medicago ...    83   3e-14
ref|XP_002530814.1| conserved hypothetical protein [Ricinus comm...    83   3e-14
ref|XP_002329304.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
ref|XP_002329305.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_003588804.1| hypothetical protein MTR_1g013410 [Medicago ...    80   1e-13

>ref|XP_003588806.1| hypothetical protein MTR_1g013430 [Medicago truncatula]
           gi|355477854|gb|AES59057.1| hypothetical protein
           MTR_1g013430 [Medicago truncatula]
          Length = 141

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
 Frame = -2

Query: 302 WHTPVPFFFGGLTTIIGLFAWALLVLACSYCTSSRDSLESEGGV----ENPVKWVLPPAE 135
           WHTP+P+ FGGL  IIGL A ALLVLACSYC  SRD+ + +       E+  +   P   
Sbjct: 25  WHTPMPYLFGGLAAIIGLIALALLVLACSYCRLSRDNQDEDHSALDNKESDPQTKKPVKV 84

Query: 134 FEPKFVVIMAGNDQPTYLAKP 72
           +E   +VIMAGN+ PT+LA P
Sbjct: 85  YEENILVIMAGNENPTFLATP 105


>ref|XP_002530814.1| conserved hypothetical protein [Ricinus communis]
           gi|223529635|gb|EEF31582.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 115

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -2

Query: 314 GSWRWHTPVPFFFGGLTTIIGLFAWALLVLACSYCTSSRDSLESEGGVENP--VKWVLPP 141
           G W W +P+P+ FGGL  ++G+ A AL++LACSY  S  D    +G  E P   +  L  
Sbjct: 12  GFWHWSSPMPYLFGGLALMLGVIAVALIILACSYRKSLSDESRGDGHEEKPGAKQAELTV 71

Query: 140 AEFEPKFVVIMAGNDQPTYLAKPAP 66
              EPK VVIMAG+D PT+LAKP P
Sbjct: 72  DSDEPKIVVIMAGDDNPTFLAKPKP 96


>ref|XP_002329304.1| predicted protein [Populus trichocarpa] gi|222870758|gb|EEF07889.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 39/81 (48%), Positives = 50/81 (61%)
 Frame = -2

Query: 314 GSWRWHTPVPFFFGGLTTIIGLFAWALLVLACSYCTSSRDSLESEGGVENPVKWVLPPAE 135
           G W W++PV +FF GL  ++GL   AL++LACSY  S   S  S+ G E P K      +
Sbjct: 16  GFWHWNSPVVYFFVGLAFMLGLITVALIILACSYRKSLSSSSRSDAGDEKPAKHEEIQVD 75

Query: 134 FEPKFVVIMAGNDQPTYLAKP 72
            EPK  VIMAG++ PTYL KP
Sbjct: 76  LEPKIAVIMAGDENPTYLLKP 96


>ref|XP_002329305.1| predicted protein [Populus trichocarpa] gi|222870759|gb|EEF07890.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -2

Query: 314 GSWRWHTPVPFFFGGLTTIIGLFAWALLVLACSYCTSSRDSLESEGGV-ENPVKWVLPPA 138
           G W W++PV + F GL  ++GL   AL++LACSY  S  +S   E  + E P K V    
Sbjct: 17  GFWHWNSPVAYVFVGLALMLGLITVALIILACSYRKSLSNSSRREAELDEKPAKQVEIQV 76

Query: 137 EFEPKFVVIMAGNDQPTYLAKP 72
           +FEPK VVIMAG++ PTYLAKP
Sbjct: 77  DFEPKVVVIMAGDENPTYLAKP 98


>ref|XP_003588804.1| hypothetical protein MTR_1g013410 [Medicago truncatula]
           gi|355477852|gb|AES59055.1| hypothetical protein
           MTR_1g013410 [Medicago truncatula]
          Length = 140

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
 Frame = -2

Query: 302 WHTPVPFFFGGLTTIIGLFAWALLVLACSYCTSSR----------DSLESEGGVENPVKW 153
           WHTP+P+ FGGL  I+GL A ALL LACS+C  SR          D+ ES+   + P+K 
Sbjct: 25  WHTPIPYLFGGLAAIMGLIALALLALACSFCKLSRNNQDGDHNDLDNKESDPQTKEPIK- 83

Query: 152 VLPPAEFEPKFVVIMAGNDQPTYLAKP 72
                 +E K +VIMAGN++PT+LA P
Sbjct: 84  -----SYEEKVLVIMAGNEKPTFLATP 105


Top