BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040855
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    84   1e-14
ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...    82   6e-14
emb|CAN80463.1| hypothetical protein VITISV_011059 [Vitis vinifera]    82   6e-14
ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra...    76   3e-12
ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220...    76   3e-12

>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 55/137 (40%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
 Frame = -3

Query: 451 HMQSSQQS-------PTHALQGHQLSPPTLQQAHPSLGESIPSSDLQQNQQSFVKQLIPH 293
           H+Q  QQ        P       Q S  T     PSL +S P S LQQNQ S V+Q    
Sbjct: 273 HLQQQQQQQQQNLLQPAQLQSSQQSSMQTSSVMQPSLMQSAPLSGLQQNQPSTVQQSAQS 332

Query: 292 ALQQHPHPFMRHQ----------QQKVLMSQHSMLSSH----QDQQLIGKHPDETNIQQN 155
            LQQHP   +R Q          QQ+  M Q S+L  H    Q QQL+G+  + TN+QQN
Sbjct: 333 MLQQHPQSVLRQQQQPQQASSIHQQQASMMQQSLLPHHHQQQQQQQLMGQQQNATNMQQN 392

Query: 154 QLIGQPCSVSNIKQQQE 104
           QLIGQ  +V +++QQQ+
Sbjct: 393 QLIGQQNNVGDMQQQQQ 409


>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 54/128 (42%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
 Frame = -3

Query: 445 QSSQQSPTHALQGHQLSPPTLQQAHPSLG-ESIPSSDLQQNQQSFVKQLIPHALQQHPHP 269
           Q  QQ  T  LQ +Q           S G +S P S LQQNQ S V+Q     LQQHP  
Sbjct: 576 QQQQQQQT-LLQSNQFQSSQQSVMQTSSGMQSAPLSGLQQNQPSSVQQSSQSVLQQHPPA 634

Query: 268 FMRHQQQ----------KVLMSQHSMLSSHQDQQLIGKHPDETNIQQNQLIGQPCSVSNI 119
            +R QQQ          +  M+Q  +L S Q QQLIG+ P+ T +Q NQLIGQ  S S++
Sbjct: 635 VLRQQQQPQQTPVMHQQQTSMTQQPILPSQQQQQLIGQPPNATTMQSNQLIGQQNSFSDL 694

Query: 118 KQQQENQR 95
           +QQQ+ Q+
Sbjct: 695 QQQQQQQQ 702


>emb|CAN80463.1| hypothetical protein VITISV_011059 [Vitis vinifera]
          Length = 288

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 56/134 (41%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
 Frame = -3

Query: 445 QSSQQSPTHALQGHQLSPPTLQQAHPSLG-ESIPSSDLQQNQQSFVKQLIPHALQQHPHP 269
           Q  QQ  T  LQ +Q           S G +S P S LQQNQ S V+Q     LQQHP  
Sbjct: 65  QQQQQQQT-LLQSNQFQSSQQSVMQTSSGMQSAPLSGLQQNQPSSVQQSSQSVLQQHPPA 123

Query: 268 FMR-----------HQQQKVLMSQHSMLSS-HQDQQLIGKHPDETNIQQNQLIGQPCSVS 125
            +R           HQQQ  +  Q  +LS  HQ QQLIG+ P+ T +Q NQLIGQ  S S
Sbjct: 124 VLRQQQQPQQTPIMHQQQTSMTQQPILLSQQHQQQQLIGQPPNATTMQSNQLIGQQNSFS 183

Query: 124 NIKQQQENQRWSEQ 83
           +++QQQ++Q  ++Q
Sbjct: 184 DLQQQQQHQLMAQQ 197


>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like, partial [Cucumis sativus]
          Length = 589

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
 Frame = -3

Query: 451 HMQSSQQSPTHALQGHQLSPPTLQQAHPSLGESIPSSDLQQNQQSFVKQLIPHALQQHPH 272
           H+   QQ+    +Q +Q+         PS+ +S   S+LQQNQQS ++Q     LQQ   
Sbjct: 270 HIPQQQQN---VMQSNQMQSSQQSVMQPSMLQS-SLSNLQQNQQSPIQQSTQSMLQQPQQ 325

Query: 271 PFMRHQ---------QQKVLMSQHSMLSSHQDQQLIGKHPDETNIQQNQLIGQPCSVSNI 119
           P +R Q          Q+  MSQ + L S Q QQLI +  + +N+QQ+ LIGQ  SV ++
Sbjct: 326 PILRQQPQSQQHAVIHQQPTMSQQTNLPSQQQQQLINQQTNSSNMQQSPLIGQQTSVGDM 385

Query: 118 KQQQENQRWSEQDQSTLSRM 59
           +QQ   Q  S   QS LS M
Sbjct: 386 QQQLPQQSRSHGQQSNLSNM 405


>ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220890 [Cucumis sativus]
          Length = 1345

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
 Frame = -3

Query: 451 HMQSSQQSPTHALQGHQLSPPTLQQAHPSLGESIPSSDLQQNQQSFVKQLIPHALQQHPH 272
           H+   QQ+    +Q +Q+         PS+ +S   S+LQQNQQS ++Q     LQQ   
Sbjct: 275 HIPQQQQN---VMQSNQMQSSQQSVMQPSMLQS-SLSNLQQNQQSPIQQSTQSMLQQPQQ 330

Query: 271 PFMRHQ---------QQKVLMSQHSMLSSHQDQQLIGKHPDETNIQQNQLIGQPCSVSNI 119
           P +R Q          Q+  MSQ + L S Q QQLI +  + +N+QQ+ LIGQ  SV ++
Sbjct: 331 PILRQQPQSQQHAVIHQQPTMSQQTNLPSQQQQQLINQQTNSSNMQQSPLIGQQTSVGDM 390

Query: 118 KQQQENQRWSEQDQSTLSRM 59
           +QQ   Q  S   QS LS M
Sbjct: 391 QQQLPQQSRSHGQQSNLSNM 410