BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040850
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_002513855.1| pentatricopeptide repeat-containing protein,...   148   5e-34
ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. l...   146   1e-33
ref|NP_193587.4| pentatricopeptide repeat-containing protein [Ar...   146   2e-33
ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32

>ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Vitis vinifera]
          Length = 595

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/104 (75%), Positives = 88/104 (84%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           GTSLVGMY KC E  D+++VFDGMKKRNTVTWTS+IAGY +NG GEEAISLFRVMKRR I
Sbjct: 302 GTSLVGMYAKCGEILDSRKVFDGMKKRNTVTWTSIIAGYARNGQGEEAISLFRVMKRRKI 361

Query: 134 YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGST 3
           + N  T+VSIL ACGS R   +GKEVHAQI+KNS+ SNIYIGST
Sbjct: 362 FANNLTVVSILRACGSTRNLLMGKEVHAQIMKNSMQSNIYIGST 405



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/103 (35%), Positives = 57/103 (55%)
 Frame = -2

Query: 311 TSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHIY 132
           ++LV  Y +C +   A   FD M +R+ V WT+MI    Q G G EA+S+F  M      
Sbjct: 202 SALVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGRGTEALSMFSQMMFNTSS 261

Query: 131 VNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGST 3
            N  T+ S+L ACG  +A   GK++H  I+K     +++IG++
Sbjct: 262 PNEFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKEDVFIGTS 304



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/103 (35%), Positives = 55/103 (53%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G++LV  Y KCEE   A +V   M  R+ V+WT++I+GY   G   EA+   + M    +
Sbjct: 403 GSTLVWFYCKCEEHPFASKVLQNMPLRDVVSWTAIISGYTSLGHEPEALEFLKEMLEEGV 462

Query: 134 YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGS 6
             N  T  S L AC  + A   GK +H+ + K    SN+++GS
Sbjct: 463 EPNPFTYSSALKACAHLEAILQGKLIHSSVNKTLALSNVFVGS 505



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/77 (42%), Positives = 48/77 (62%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G++L+ MY KC    +A +VFD M +RN V+W +MI GY +NGL  EA+ L   M+   I
Sbjct: 504 GSALINMYAKCGYVSEAIQVFDSMPQRNLVSWKAMIVGYARNGLCGEALKLMYRMQAEGI 563

Query: 134 YVNGSTIVSILGACGSV 84
            V+   + ++L ACG V
Sbjct: 564 EVDDYILTTVLSACGDV 580



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/92 (33%), Positives = 54/92 (58%)
 Frame = -2

Query: 308 SLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHIYV 129
           +L+  Y +  +  +A++VFD M +RN V+WT+++ GY + G  +EA+ LF       +  
Sbjct: 103 NLISAYSRFGKLVEARKVFDKMPERNVVSWTAVVNGYSRYGFDDEALRLFDDCIENGVRA 162

Query: 128 NGSTIVSILGACGSVRASPLGKEVHAQILKNS 33
           NG T V +L  C       LG+++HA I+K++
Sbjct: 163 NGKTFVCVLNLCSKRLDFELGRQIHACIVKDN 194


>ref|XP_002513855.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546941|gb|EEF48438.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/104 (68%), Positives = 84/104 (80%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           GTSLV MY KC E  D+K VFDGM+KRNTVTWTS+IAGY + GLGEEAI LFRVMKRR I
Sbjct: 205 GTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSIIAGYARKGLGEEAIRLFRVMKRRKI 264

Query: 134 YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGST 3
             N  T+VS+L ACGS+ AS  G+EVHAQI+K+ + SN+Y+GST
Sbjct: 265 ISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQSNVYLGST 308



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/103 (36%), Positives = 56/103 (54%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G++LV  Y KC E   A +V   M  RN V+WT+MI+GY+  G   EA+   + M    +
Sbjct: 306 GSTLVWFYCKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMMDEGV 365

Query: 134 YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGS 6
             N  T  S L AC ++ +   GK +H+   K   +SN+Y+GS
Sbjct: 366 EPNEFTYSSALKACANLESVLQGKLIHSFANKTPASSNVYVGS 408



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/92 (36%), Positives = 54/92 (58%)
 Frame = -2

Query: 308 SLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHIYV 129
           +L+ +Y +  E  +A++VFD M +R  V+WT+MI GYV  GL +EA+ LF  +    +  
Sbjct: 6   NLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIENGVTA 65

Query: 128 NGSTIVSILGACGSVRASPLGKEVHAQILKNS 33
           N  T V IL  C       LG+++HA ++K +
Sbjct: 66  NNRTFVCILNVCSKRLDFELGRQIHACVVKGN 97



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/103 (31%), Positives = 57/103 (55%)
 Frame = -2

Query: 311 TSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHIY 132
           +++V  Y +C +   A   F  +++++ V WTS+I+   Q G GEEA  +F  M      
Sbjct: 105 SAIVSFYAQCGDLESAFCAFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFL 164

Query: 131 VNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGST 3
            N  T+ +IL ACG  +A   G+++H  I+K     +++IG++
Sbjct: 165 PNEFTVCAILKACGEKKALKFGRQLHCAIVKGMYKDDVFIGTS 207



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/77 (41%), Positives = 47/77 (61%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G++L+ MY KC    DA +VFD M +RN ++W +MI  Y +NGL  EA+ L   M+   I
Sbjct: 407 GSALIYMYSKCGYLSDAIQVFDSMPERNLISWKTMILSYARNGLCREALKLMYRMQAEGI 466

Query: 134 YVNGSTIVSILGACGSV 84
            V+     S++G+CG V
Sbjct: 467 EVDDYIYASVMGSCGDV 483


>ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 616

 Score =  146 bits (369), Expect = 1e-33
 Identities = 70/104 (67%), Positives = 82/104 (78%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           GTSL+ MY KC E  D ++VFDGM  RNTVTWTS+IA + + G GEEAISLFRVMKRRH+
Sbjct: 322 GTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRVMKRRHL 381

Query: 134 YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGST 3
             N  T+VSIL ACGSV A  LGKE+HAQI+KNS+  N+YIGST
Sbjct: 382 IANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST 425



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/103 (32%), Positives = 62/103 (60%)
 Frame = -2

Query: 311 TSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHIY 132
           +SLV  Y +C E   A R FD M++++ ++WT++I+   + G G +AI +F  M      
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGNKAIFMFIGMLNHGFL 281

Query: 131 VNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGST 3
            N  T+ SIL AC   +A   G++VH+ ++K  + +++++G++
Sbjct: 282 PNEFTVCSILKACSEEKAIRFGRQVHSLVVKRMIKTDVFVGTS 324



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/103 (34%), Positives = 58/103 (56%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G++LV +Y KC E+RDA  V   +  R+ V+WT+MI+G    G   EA+   + M +  +
Sbjct: 423 GSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV 482

Query: 134 YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGS 6
             N  T  S L AC +  +  +G+ +H+   KN   SN+++GS
Sbjct: 483 EPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGS 525



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G +L+   V+  +   A++VFD M  RNTVTWT+MI GY++ GL +EA SLF    +  I
Sbjct: 120 GNNLISSCVRLGDLVYARKVFDSMPDRNTVTWTAMIDGYLKFGLEDEAFSLFEDYVKHGI 179

Query: 134 -YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNI 18
            + N    V +L  C       LG++VH  ++K  V + I
Sbjct: 180 RFTNERMFVCLLNLCSRRSEFELGRQVHGNMVKVGVGNLI 219



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/77 (38%), Positives = 44/77 (57%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G++L+ MY KC    +A RVFD M ++N V+W +MI GY +NG   EA+ L   M+    
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGF 583

Query: 134 YVNGSTIVSILGACGSV 84
            V+     +IL  CG +
Sbjct: 584 EVDDYIFATILSTCGDI 600


>ref|NP_193587.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122236144|sp|Q0WNP3.1|PP319_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g18520 gi|110738662|dbj|BAF01256.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332658657|gb|AEE84057.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 617

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/104 (66%), Positives = 82/104 (78%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           GTSL+ MY KC E  D ++VFDGM  RNTVTWTS+IA + + G GEEAISLFR+MKRRH+
Sbjct: 322 GTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHL 381

Query: 134 YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGST 3
             N  T+VSIL ACGSV A  LGKE+HAQI+KNS+  N+YIGST
Sbjct: 382 IANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST 425



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/103 (32%), Positives = 62/103 (60%)
 Frame = -2

Query: 311 TSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHIY 132
           +SLV  Y +C E   A R FD M++++ ++WT++I+   + G G +AI +F  M      
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL 281

Query: 131 VNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGST 3
            N  T+ SIL AC   +A   G++VH+ ++K  + +++++G++
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTS 324



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/103 (34%), Positives = 58/103 (56%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G++LV +Y KC E+RDA  V   +  R+ V+WT+MI+G    G   EA+   + M +  +
Sbjct: 423 GSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV 482

Query: 134 YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGS 6
             N  T  S L AC +  +  +G+ +H+   KN   SN+++GS
Sbjct: 483 EPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGS 525



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G +L+   V+  +   A++VFD M ++NTVTWT+MI GY++ GL +EA +LF    +  I
Sbjct: 120 GNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGI 179

Query: 134 -YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNI 18
            + N    V +L  C       LG++VH  ++K  V + I
Sbjct: 180 RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLI 219



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/77 (38%), Positives = 44/77 (57%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G++L+ MY KC    +A RVFD M ++N V+W +MI GY +NG   EA+ L   M+    
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGF 583

Query: 134 YVNGSTIVSILGACGSV 84
            V+     +IL  CG +
Sbjct: 584 EVDDYIFATILSTCGDI 600


>ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Cucumis sativus]
           gi|449490224|ref|XP_004158542.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g18520-like [Cucumis sativus]
          Length = 619

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/104 (66%), Positives = 83/104 (79%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           GTSLV MY KC    D++ VFDGM+ RNTVTWTS+IAGY + GLGEEA++LFR+MKR+ I
Sbjct: 326 GTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRI 385

Query: 134 YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGST 3
             N  TIVSIL ACGS+ AS  G+EVHAQI+KNS  +NI+IGST
Sbjct: 386 PANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGST 429



 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 34/103 (33%), Positives = 62/103 (60%)
 Frame = -2

Query: 311 TSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHIY 132
           ++++  Y +C++   A   F+ M++R+ V WTSMI    Q GLG EAIS+F  M      
Sbjct: 226 SAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFL 285

Query: 131 VNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGST 3
            N  ++ S+L ACG  R   +G+++H  I+K  + +++++G++
Sbjct: 286 PNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIKNDVFVGTS 328



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/103 (34%), Positives = 57/103 (55%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G +L+  Y++     DA++VFD M  R+ VTWT++I GY+   L EEA++LF    +  +
Sbjct: 125 GNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKSGV 184

Query: 134 YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGS 6
             NG   V IL  C       LG+++H  I+K +   N+ + S
Sbjct: 185 LANGQMFVCILNLCAKRLDFELGRQIHGVIVKGN-RGNLIVDS 226



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G++L+ MY KC    +A +VFD M  RN V+W +MI  Y +NGL  EA+ L   M+    
Sbjct: 528 GSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGF 587

Query: 134 YVNGSTIVSILGACGSVR 81
            V+   + ++ GACG V+
Sbjct: 588 EVDDYILGTVYGACGDVK 605



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/103 (33%), Positives = 51/103 (49%)
 Frame = -2

Query: 314 GTSLVGMYVKCEETRDAKRVFDGMKKRNTVTWTSMIAGYVQNGLGEEAISLFRVMKRRHI 135
           G++LV  Y KC     A  V   M  R+ V+WT++I+G    G   EA+   + M    +
Sbjct: 427 GSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGV 486

Query: 134 YVNGSTIVSILGACGSVRASPLGKEVHAQILKNSVNSNIYIGS 6
             N  T  S L AC  + A   GK +H+   K S  SN+++GS
Sbjct: 487 EPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGS 529