BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040820
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198226.1| pre-mRNA-splicing factor SYF1 [Arabidopsis thal...    71   1e-10
ref|XP_001771583.1| predicted protein [Physcomitrella patens sub...    67   2e-09
ref|XP_001748766.1| hypothetical protein [Monosiga brevicollis M...    67   2e-09
ref|XP_003660429.1| hypothetical protein MYCTH_2298741 [Myceliop...    63   3e-08
ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arab...    62   5e-08

>ref|NP_198226.1| pre-mRNA-splicing factor SYF1 [Arabidopsis thaliana]
            gi|7682783|gb|AAF67364.1| Hypothetical protein T32B20.g
            [Arabidopsis thaliana] gi|332006447|gb|AED93830.1|
            pre-mRNA-splicing factor SYF1 [Arabidopsis thaliana]
          Length = 917

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 58/171 (33%), Positives = 71/171 (41%), Gaps = 70/171 (40%)
 Frame = +1

Query: 1    RAIYYQS---ACSRHSDEFWSNWQQFETQHGNEDTFRELLRCKRSVSALKSHIEVI---- 159
            RA+Y  S   A  R   EFW+ W +FE QHGNEDT+RE+LR KRSVSA  S    I    
Sbjct: 717  RALYKYSSQFADPRSDPEFWNKWHEFEVQHGNEDTYREMLRIKRSVSASYSQTHFILPEN 776

Query: 160  -------------------------------------RTP-----DSGRNV--------- 186
                                                  TP     D GR V         
Sbjct: 777  MMQKDKLLDVEDAKGELKRAGLPEDEMAALERQLLSTTTPTEPAKDGGRRVGFVSAGVIS 836

Query: 187  -SGNN---------EEIDLPEGCD--SDEDHKIEVSQKAVPSTVYGQLVKK 303
             SG N         E+I+LP+  D  SD D  +E+SQK VP+ V+G L +K
Sbjct: 837  QSGENEGKPVTGNGEDIELPDESDDESDGDDHVEISQKEVPAAVFGGLARK 887


>ref|XP_001771583.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162677139|gb|EDQ63613.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 911

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
 Frame = +1

Query: 1    RAIYY---QSACSRHSDEFWSNWQQFETQHGNEDTFRELLRCKRSVSALKSHIEVIRTPD 171
            RAIY    QSA  R   EFWS W  FE QHGNEDTFRE+LR KRSV+A  S +  I    
Sbjct: 709  RAIYVHASQSADPRSDTEFWSKWNDFEVQHGNEDTFREMLRIKRSVTASYSQMHFILPEY 768

Query: 172  SGRNVSGN---NEEIDLPEGCDSDEDHKIEVSQKAVPST 279
              +  +G     E +D   G     D  +   +K + S+
Sbjct: 769  LMQRETGKVSMEEAVDALAGAGISRDDGMAALEKEMASS 807


>ref|XP_001748766.1| hypothetical protein [Monosiga brevicollis MX1]
            gi|163772728|gb|EDQ86376.1| predicted protein [Monosiga
            brevicollis MX1]
          Length = 926

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 49/150 (32%)
 Frame = +1

Query: 1    RAIYYQSA--CS-RHSDEFWSNWQQFETQHGNEDTFRELLRCKRSVSA---LKSHIEVIR 162
            RAIY  ++  C  + + +FW  W+ FE +HGNEDT+RE+LR KRSV+A     S++ V R
Sbjct: 769  RAIYSHTSQYCEPKSAKKFWDAWEDFEVRHGNEDTYREMLRIKRSVAAQSNTSSNVNVFR 828

Query: 163  TPD---------------------------------SGRNVSGNNEEIDLPEGCDSDED- 240
              +                                 +G   +GN +EIDL +  D DE+ 
Sbjct: 829  AAEEAARALRDGGNAMAAAESEAAARAAPQQTAFVKAGGAPAGNRDEIDLDDDDDDDEEE 888

Query: 241  ---------HKIEVSQKAVPSTVYGQLVKK 303
                     + +++ +KAVP  V+G +  K
Sbjct: 889  DGNATETATNNVDIEEKAVPDEVFGGIGAK 918


>ref|XP_003660429.1| hypothetical protein MYCTH_2298741 [Myceliophthora thermophila ATCC
           42464] gi|347007696|gb|AEO55184.1| hypothetical protein
           MYCTH_2298741 [Myceliophthora thermophila ATCC 42464]
          Length = 823

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 11/90 (12%)
 Frame = +1

Query: 1   RAIYYQSACSRHSD-----EFWSNWQQFETQHGNEDTFRELLRCKRSVSALKS---HI-- 150
           RAIY    CS+  D     EFW+ W+QFE QHGNEDTF+E+LR KRSV A  +   H   
Sbjct: 694 RAIY--GHCSQFCDPRTDPEFWAKWEQFEVQHGNEDTFKEMLRIKRSVQAKYNTDVHFIA 751

Query: 151 -EVIRTPDSGRNVSGNNEEIDLPEGCDSDE 237
            + +    + R  +G  +++D PE  D+ E
Sbjct: 752 SQALARSQAQRQQNGGEQQVD-PEVADAME 780


>ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arabidopsis lyrata subsp.
            lyrata] gi|297318163|gb|EFH48585.1| hypothetical protein
            ARALYDRAFT_489660 [Arabidopsis lyrata subsp. lyrata]
          Length = 928

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
 Frame = +1

Query: 1    RAIYY---QSACSRHSDEFWSNWQQFETQHGNEDTFRELLRCKRSVSALKSHIEVIRTPD 171
            RA+Y    Q A  R   EFW+ W +FE QHGNEDT+RE+LR KRSVSA  S    I    
Sbjct: 726  RALYKYASQFADPRSDPEFWNKWHEFEVQHGNEDTYREMLRIKRSVSASYSQTHFILP-- 783

Query: 172  SGRNVSGNNEEIDLPEGCDSDEDHKIEVSQKAVPSTVYGQLVKKV 306
               N+   ++ +D+       ED K E+ +  +P      L +++
Sbjct: 784  --ENMMQKDKLLDV-------EDAKDELKKAGLPEDEMAALERQL 819