BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040803
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida]      56   3e-06

>gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida]
          Length = 435

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
 Frame = -2

Query: 343 FMRQFVVVYFDDTLIFXXXXXXXXXXXSGLIYPSXXXXXXXTKEVFLYG*FC*IFL--VI 170
           F+ +FVVVYFDD LI+             ++            +   +G    +FL  V+
Sbjct: 23  FINKFVVVYFDDILIYSRTIDEHVDHLRQVLEALRAEKLYANFKKCAFGVDKVVFLGFVV 82

Query: 169 SRDENHADDSKVHAILDWHVPSIIIEVRSCHGLTSFYR 56
           S      D+SKV AI DW  P+ + +VRS HGL SFYR
Sbjct: 83  SAQGVEVDESKVEAIRDWPTPTTVTQVRSFHGLASFYR 120