BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040752
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    75   7e-12
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma...    75   7e-12
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...    74   2e-11
emb|CBI35661.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ...    72   6e-11

>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
            phosphatase-like 3-like [Cucumis sativus]
          Length = 1249

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/63 (60%), Positives = 47/63 (74%)
 Frame = -1

Query: 251  DIVGSSQTLDIWGDVEDLTAEYNDLQKADFLRERARRIEDQVEMFAARKLSLVLNLDHIL 72
            D+  SS++   WGD+E L   Y+D QKA   RERARRIE+Q +MFAARKL LVL+LDH L
Sbjct: 887  DMAASSRSQGAWGDLEHLFDSYDDKQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTL 946

Query: 71   LHS 63
            L+S
Sbjct: 947  LNS 949


>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Cucumis sativus]
          Length = 1249

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/63 (60%), Positives = 47/63 (74%)
 Frame = -1

Query: 251  DIVGSSQTLDIWGDVEDLTAEYNDLQKADFLRERARRIEDQVEMFAARKLSLVLNLDHIL 72
            D+  SS++   WGD+E L   Y+D QKA   RERARRIE+Q +MFAARKL LVL+LDH L
Sbjct: 887  DMAASSRSQGAWGDLEHLFDSYDDKQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTL 946

Query: 71   LHS 63
            L+S
Sbjct: 947  LNS 949


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/64 (59%), Positives = 46/64 (71%)
 Frame = -1

Query: 254  EDIVGSSQTLDIWGDVEDLTAEYNDLQKADFLRERARRIEDQVEMFAARKLSLVLNLDHI 75
            E   G  Q+ + WGDVE L   Y+D QKA   RERARRIE+Q +MF+ARKL LVL+LDH 
Sbjct: 875  ESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHT 934

Query: 74   LLHS 63
            LL+S
Sbjct: 935  LLNS 938


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/64 (59%), Positives = 46/64 (71%)
 Frame = -1

Query: 254  EDIVGSSQTLDIWGDVEDLTAEYNDLQKADFLRERARRIEDQVEMFAARKLSLVLNLDHI 75
            E   G  Q+ + WGDVE L   Y+D QKA   RERARRIE+Q +MF+ARKL LVL+LDH 
Sbjct: 821  ESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHT 880

Query: 74   LLHS 63
            LL+S
Sbjct: 881  LLNS 884


>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 1195

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/57 (63%), Positives = 44/57 (77%)
 Frame = -1

Query: 233  QTLDIWGDVEDLTAEYNDLQKADFLRERARRIEDQVEMFAARKLSLVLNLDHILLHS 63
            +T + WGDVE L   YND QKA   RERARRIE+Q ++F+ARKL LVL+LDH LL+S
Sbjct: 839  RTQNAWGDVEHLFEGYNDQQKAAIQRERARRIEEQKKLFSARKLCLVLDLDHTLLNS 895