BLASTX nr result

ID: Cimicifuga21_contig00040747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040747
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30066.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-li...   132   3e-29
ref|XP_003518157.1| PREDICTED: peptide chain release factor 2-li...   129   2e-28
emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]   127   7e-28
ref|XP_003589939.1| Peptide chain release factor [Medicago trunc...   127   1e-27

>emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  132 bits (332), Expect = 3e-29
 Identities = 77/126 (61%), Positives = 87/126 (69%), Gaps = 6/126 (4%)
 Frame = +2

Query: 2   YAYGYLSGERGRHLMIRGSSDASILLETGLAYVDVIPLFLKNDSDLQIDDKDLVISSTLQ 181
           Y YGYLSGERG H MIR S D SIL ETG A VDVIPLFL+   DLQIDD DL ISS   
Sbjct: 232 YGYGYLSGERGVHHMIRSSDDESILHETGSAVVDVIPLFLETAPDLQIDDGDLRISS--- 288

Query: 182 DEEDRPVC------QPKPAISIKHILTGIIVQSSGERSRFANKAKAINRLKAKLLVIAMQ 343
                P C      +   A+ I+HI TGI VQSSGERS FANK +A+NRLKAKL+V AM+
Sbjct: 289 -----PSCHGVEQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAME 343

Query: 344 QGVSDV 361
           QG+ +V
Sbjct: 344 QGIPEV 349


>ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 417

 Score =  132 bits (332), Expect = 3e-29
 Identities = 77/126 (61%), Positives = 87/126 (69%), Gaps = 6/126 (4%)
 Frame = +2

Query: 2   YAYGYLSGERGRHLMIRGSSDASILLETGLAYVDVIPLFLKNDSDLQIDDKDLVISSTLQ 181
           Y YGYLSGERG H MIR S D SIL ETG A VDVIPLFL+   DLQIDD DL ISS   
Sbjct: 235 YGYGYLSGERGVHHMIRSSDDESILHETGSAVVDVIPLFLETAPDLQIDDGDLRISS--- 291

Query: 182 DEEDRPVC------QPKPAISIKHILTGIIVQSSGERSRFANKAKAINRLKAKLLVIAMQ 343
                P C      +   A+ I+HI TGI VQSSGERS FANK +A+NRLKAKL+V AM+
Sbjct: 292 -----PSCHGVEQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAME 346

Query: 344 QGVSDV 361
           QG+ +V
Sbjct: 347 QGIPEV 352


>ref|XP_003518157.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 385

 Score =  129 bits (324), Expect = 2e-28
 Identities = 72/121 (59%), Positives = 88/121 (72%)
 Frame = +2

Query: 5   AYGYLSGERGRHLMIRGSSDASILLETGLAYVDVIPLFLKNDSDLQIDDKDLVISSTLQD 184
           AYGYLSGE+G H MIRGS + S  LE   A VDVIP+FL+N  DL+ID +DL+ISS L  
Sbjct: 208 AYGYLSGEKGVHYMIRGSPNESSQLEASSATVDVIPMFLENACDLEIDSEDLIISSPLIH 267

Query: 185 EEDRPVCQPKPAISIKHILTGIIVQSSGERSRFANKAKAINRLKAKLLVIAMQQGVSDVK 364
            E++   Q    + I+HI TGI VQSSGERS FANK KA+NRLKAKLLV A +Q V+ +K
Sbjct: 268 GENKR--QTDHTVCIQHIPTGISVQSSGERSYFANKMKALNRLKAKLLVTAKEQRVASIK 325

Query: 365 N 367
           +
Sbjct: 326 S 326


>emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]
          Length = 450

 Score =  127 bits (320), Expect = 7e-28
 Identities = 77/127 (60%), Positives = 87/127 (68%), Gaps = 7/127 (5%)
 Frame = +2

Query: 2   YAYGYLSGERGRHLMIRGSSDASILLE-TGLAYVDVIPLFLKNDSDLQIDDKDLVISSTL 178
           Y YGYLSGERG H MIR S D SIL E TG A VDVIPLFL+   DLQIDD DL ISS  
Sbjct: 267 YGYGYLSGERGVHHMIRSSDDESILHEQTGSAVVDVIPLFLETAPDLQIDDGDLRISS-- 324

Query: 179 QDEEDRPVC------QPKPAISIKHILTGIIVQSSGERSRFANKAKAINRLKAKLLVIAM 340
                 P C      +   A+ I+HI TGI VQSSGERS FANK +A+NRLKAKL+V AM
Sbjct: 325 ------PSCHGVEQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAM 378

Query: 341 QQGVSDV 361
           +QG+ +V
Sbjct: 379 EQGIPEV 385


>ref|XP_003589939.1| Peptide chain release factor [Medicago truncatula]
           gi|355478987|gb|AES60190.1| Peptide chain release factor
           [Medicago truncatula]
          Length = 538

 Score =  127 bits (318), Expect = 1e-27
 Identities = 71/119 (59%), Positives = 86/119 (72%)
 Frame = +2

Query: 5   AYGYLSGERGRHLMIRGSSDASILLETGLAYVDVIPLFLKNDSDLQIDDKDLVISSTLQD 184
           AYGYL GE+G H +IRGS + S  LET  A VDVIPLFL+   DL+ID +DL+ISS L  
Sbjct: 363 AYGYLLGEKGVHHLIRGSPNESSQLETSTATVDVIPLFLEKALDLEIDSEDLIISSPLIH 422

Query: 185 EEDRPVCQPKPAISIKHILTGIIVQSSGERSRFANKAKAINRLKAKLLVIAMQQGVSDV 361
            E +   Q +  + I HI TGI VQSSGERS+FANK KA+NRLKAKL VIA++QGV  +
Sbjct: 423 GEQKR--QTQRIVCIHHIPTGITVQSSGERSQFANKMKALNRLKAKLQVIAIEQGVGSI 479


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