BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040632
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515124.1| pentatricopeptide repeat-containing protein,...   100   1e-19
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
ref|XP_002334407.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15

>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 898

 Score =  100 bits (249), Expect = 1e-19
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -1

Query: 241 LTPHMYNSVLVALVRKNQVGLALSMFYKLLQVSN--GDGCVVPNALACNELFVALRKADM 68
           L PHMY+SVLVAL RKNQ+GLALS+F+KLL+ SN    G  VP ++ACN L VALRKADM
Sbjct: 181 LNPHMYDSVLVALTRKNQIGLALSIFFKLLETSNDIDIGVSVPGSVACNTLLVALRKADM 240

Query: 67  REEFKRVFEKLREKEGVELDT 5
           R EFK+VF+KL+   G ELDT
Sbjct: 241 RVEFKKVFDKLKGM-GFELDT 260


>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -1

Query: 241 LTPHMYNSVLVALVRKNQVGLALSMFYKLLQVSNGDGCV-VPNALACNELFVALRKADMR 65
           L  ++Y+SVLVAL+RKNQ+GLAL +F+KLL    G G V VP + ACN+L VALRKADM+
Sbjct: 153 LNSYVYDSVLVALIRKNQLGLALPLFFKLLGGDEGQGGVPVPESNACNQLLVALRKADMK 212

Query: 64  EEFKRVFEKLREKEGVELDT 5
            EF+ VFEKLR K+  +LDT
Sbjct: 213 IEFRNVFEKLRAKKDFDLDT 232


>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
           gi|449523383|ref|XP_004168703.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
          Length = 803

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/80 (63%), Positives = 58/80 (72%), Gaps = 9/80 (11%)
 Frame = -1

Query: 226 YNSVLVALVRKNQVGLALSMFYKLLQVSNGDGCV---------VPNALACNELFVALRKA 74
           YNSVLVAL+RKNQVGLALS+F+KLL   N  G V         +PN+LACNEL VALRK 
Sbjct: 163 YNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKL 222

Query: 73  DMREEFKRVFEKLREKEGVE 14
           DMR EFK+VF+KLR  E  E
Sbjct: 223 DMRVEFKKVFDKLRAIESFE 242


>ref|XP_002334407.1| predicted protein [Populus trichocarpa] gi|222872045|gb|EEF09176.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/82 (56%), Positives = 61/82 (74%), Gaps = 5/82 (6%)
 Frame = -1

Query: 235 PHMYNSVLVALVRKNQVGLALSMFYKLLQVSNGD-----GCVVPNALACNELFVALRKAD 71
           PHMY+S++VAL +KNQVGLALS+ +KLL+ S+G+     G  +P ++ACN L VALR  +
Sbjct: 135 PHMYDSIIVALAKKNQVGLALSIMFKLLEASDGNEENAVGVSLPGSVACNALLVALRNGE 194

Query: 70  MREEFKRVFEKLREKEGVELDT 5
           M+ EFK VF KLR K G EL+T
Sbjct: 195 MKVEFKTVFAKLRGKVGFELNT 216


>ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|222844415|gb|EEE81962.1|
           predicted protein [Populus trichocarpa]
          Length = 640

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/80 (55%), Positives = 59/80 (73%), Gaps = 5/80 (6%)
 Frame = -1

Query: 229 MYNSVLVALVRKNQVGLALSMFYKLLQVSNGD-----GCVVPNALACNELFVALRKADMR 65
           MY+S++VAL +KNQVGLALS+ +KLL+ S+G+     G  +P ++ACN L VALR  +M+
Sbjct: 1   MYDSIIVALAKKNQVGLALSIMFKLLEASDGNEENAVGVSLPGSVACNALLVALRNGEMK 60

Query: 64  EEFKRVFEKLREKEGVELDT 5
            EFK VF KLR K G EL+T
Sbjct: 61  VEFKTVFAKLRGKGGFELNT 80