BLASTX nr result

ID: Cimicifuga21_contig00040610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040610
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263533.1| PREDICTED: LOB domain-containing protein 29 ...   102   4e-20
emb|CAN75719.1| hypothetical protein VITISV_037620 [Vitis vinifera]   102   4e-20
gb|AFK37396.1| unknown [Lotus japonicus]                               66   3e-09
ref|XP_002534416.1| LOB domain-containing protein, putative [Ric...    65   9e-09
ref|XP_003536931.1| PREDICTED: LOB domain-containing protein 29-...    64   1e-08

>ref|XP_002263533.1| PREDICTED: LOB domain-containing protein 29 [Vitis vinifera]
           gi|297744117|emb|CBI37087.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  102 bits (254), Expect = 4e-20
 Identities = 51/110 (46%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
 Frame = +1

Query: 91  EKFSATFPSYPHDDQGLFHIDDSKPVQQILSNTFNNPENMSYYDNGFLNPNSMADYNHSA 270
           EKF    PSY  D Q  F +++   V Q   N  +N E M Y  +GF++P+ M +Y +S 
Sbjct: 123 EKFFGKLPSYQQDFQSWFQLENLNTVPQFDPNLASNSETMPYSQSGFVDPSPMENYKNSM 182

Query: 271 MTEGNVQYPSFEASSHDMASLDMQMNTRKWAFQ-DTEDLQSMAFAYLQNS 417
             E NV + SFE +SH MASLDMQ N RKWA+Q D ++LQS+AF Y+++S
Sbjct: 183 FPEENVSFASFEEASHSMASLDMQGNRRKWAYQDDADELQSVAFGYIRHS 232


>emb|CAN75719.1| hypothetical protein VITISV_037620 [Vitis vinifera]
          Length = 232

 Score =  102 bits (254), Expect = 4e-20
 Identities = 51/110 (46%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
 Frame = +1

Query: 91  EKFSATFPSYPHDDQGLFHIDDSKPVQQILSNTFNNPENMSYYDNGFLNPNSMADYNHSA 270
           EKF    PSY  D Q  F +++   V Q   N  +N E M Y  +GF++P+ M +Y +S 
Sbjct: 123 EKFFGKLPSYQQDFQSWFQLENLNTVPQFDPNLASNSETMPYSQSGFVDPSPMENYKNSM 182

Query: 271 MTEGNVQYPSFEASSHDMASLDMQMNTRKWAFQ-DTEDLQSMAFAYLQNS 417
             E NV + SFE +SH MASLDMQ N RKWA+Q D ++LQS+AF Y+++S
Sbjct: 183 FPEENVSFASFEEASHSMASLDMQGNRRKWAYQDDADELQSVAFGYIRHS 232


>gb|AFK37396.1| unknown [Lotus japonicus]
          Length = 236

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
 Frame = +1

Query: 61  NGFTTSRPQEEKFSATFPSYPHDDQGLFHIDDSKPVQQILSNTFNNPENMSYYDNGFL-- 234
           N  +   P E+       ++P D Q  F +++S    +   N  NN     YY N  L  
Sbjct: 120 NASSNESPNEKYLEKPNNAFPQDLQSWFQMENSNMGSEFSPNLSNNYAATQYYGNNTLMD 179

Query: 235 -NPNSMADYNHSAMTEGNVQYPSFEASSHDMASLDMQMNTRKWAFQDTEDLQSMAFAY 405
            NP    +Y +S + + N  + SFE  S+ M S DMQ+N+R W F + EDL S+AF Y
Sbjct: 180 LNPIGN-NYQNSGVKDENSSFSSFEECSNSM-SYDMQINSRTWGFDEAEDLHSVAFGY 235


>ref|XP_002534416.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223525339|gb|EEF27968.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 225

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
 Frame = +1

Query: 61  NGFTTSRPQEEKFSATFPSYPHDDQGLFHIDDSKPVQQILSNTFNNPENMSYYDNGFLNP 240
           NG  T+ P + K+     S P D Q  F  ++S  + Q       NP   +  +NGFL+P
Sbjct: 114 NGSATANPND-KYYGKPSSLPQDLQSWFQSENSNTIPQF------NPSFTTAGENGFLDP 166

Query: 241 NSMADYNHSAMTEGNVQYPSFE--ASSHDMASLDMQMNTRKWAFQDTEDLQSMAFAYLQN 414
            SM  Y  S+ T     + SFE  +SS DM + + Q NT     QD +DL+S+AF Y+Q+
Sbjct: 167 YSMGSYGSSSTTA--TSFDSFEEASSSFDMQTDNKQWNTSYHHHQDPDDLRSVAFGYIQH 224

Query: 415 S 417
           S
Sbjct: 225 S 225


>ref|XP_003536931.1| PREDICTED: LOB domain-containing protein 29-like [Glycine max]
          Length = 239

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
 Frame = +1

Query: 61  NGFTTSRPQEEKFSATFPSYPHDDQGLFHIDDSKPVQQILSNTFNNPENMSYYDNGF--- 231
           NG     P E+    +  + P D Q  F +++S    + L N   N     Y +N     
Sbjct: 114 NGTINENPNEKLLEKSSAALPQDLQSWFQLENSNLGPEFLPNMCTNLSTQHYGNNALMME 173

Query: 232 -LNPNSMADYNHSAMTEGNVQYPSFEASSHDMASL--DMQMNTRKWAFQDTEDLQSMAFA 402
            LNP  + + N  AM E +  + SF+ SS++  S+  DMQ N R W F + EDL S+AF 
Sbjct: 174 DLNPIGVNNENSGAMEESS-SFSSFDESSNNSYSMSYDMQTNRRTWGFHEVEDLHSVAFG 232

Query: 403 Y 405
           Y
Sbjct: 233 Y 233