BLASTX nr result

ID: Cimicifuga21_contig00040596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040596
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7...    59   4e-07
ref|XP_003574025.1| PREDICTED: U-box domain-containing protein 7...    59   5e-07
emb|CAN74844.1| hypothetical protein VITISV_037043 [Vitis vinifera]    58   7e-07
ref|XP_002528359.1| Pre-mRNA-splicing factor, putative [Ricinus ...    58   9e-07
ref|XP_003555746.1| PREDICTED: U-box domain-containing protein 7...    57   1e-06

>ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera]
           gi|296083725|emb|CBI23714.3| unnamed protein product
           [Vitis vinifera]
          Length = 524

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = -3

Query: 210 YPPDIIATGGVDSNAVLFDRTSGQIVSSLNGYSKKV 103
           Y  DIIATGGVD+NAVLFDR SGQI+S+L+G+SKKV
Sbjct: 234 YSKDIIATGGVDANAVLFDRQSGQILSTLSGHSKKV 269


>ref|XP_003574025.1| PREDICTED: U-box domain-containing protein 72-like [Brachypodium
           distachyon]
          Length = 527

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/45 (62%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
 Frame = -3

Query: 234 PGAPEKPVYPP-DIIATGGVDSNAVLFDRTSGQIVSSLNGYSKKV 103
           PG     ++P  DIIATGG+D+NAVLFDR SGQI+S+L+G+SKK+
Sbjct: 222 PGILSMDIHPSKDIIATGGIDTNAVLFDRPSGQILSTLSGHSKKI 266


>emb|CAN74844.1| hypothetical protein VITISV_037043 [Vitis vinifera]
          Length = 279

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -3

Query: 201 DIIATGGVDSNAVLFDRTSGQIVSSLNGYSKKV 103
           DIIATGGVDSNAVLFDR SGQI+S+L+G+SKKV
Sbjct: 115 DIIATGGVDSNAVLFDRQSGQILSTLSGHSKKV 147


>ref|XP_002528359.1| Pre-mRNA-splicing factor, putative [Ricinus communis]
           gi|223532227|gb|EEF34031.1| Pre-mRNA-splicing factor,
           putative [Ricinus communis]
          Length = 531

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 210 YPPDIIATGGVDSNAVLFDRTSGQIVSSLNGYSKKV 103
           Y  DIIATGGVDS AVLFDR SGQI+S+L+G+SKKV
Sbjct: 234 YSKDIIATGGVDSTAVLFDRPSGQILSTLSGHSKKV 269


>ref|XP_003555746.1| PREDICTED: U-box domain-containing protein 72 [Glycine max]
          Length = 525

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/37 (67%), Positives = 34/37 (91%)
 Frame = -3

Query: 213 VYPPDIIATGGVDSNAVLFDRTSGQIVSSLNGYSKKV 103
           +Y  D+IATGG+D+NAV+FDR SGQI+S+L+G+SKKV
Sbjct: 233 LYSKDLIATGGIDTNAVIFDRPSGQILSTLSGHSKKV 269


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