BLASTX nr result

ID: Cimicifuga21_contig00040579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040579
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q949G3.1|PDR1_NICPL RecName: Full=Pleiotropic drug resistance...    75   8e-24
emb|CBI36226.3| unnamed protein product [Vitis vinifera]               74   9e-23
ref|XP_003632874.1| PREDICTED: pleiotropic drug resistance prote...    74   9e-23
ref|XP_003632872.1| PREDICTED: pleiotropic drug resistance prote...    74   9e-23
ref|XP_003632871.1| PREDICTED: pleiotropic drug resistance prote...    74   9e-23

>sp|Q949G3.1|PDR1_NICPL RecName: Full=Pleiotropic drug resistance protein 1; AltName:
            Full=NpPDR1 gi|14331118|emb|CAC40990.1| ABC1 protein
            [Nicotiana plumbaginifolia]
          Length = 1436

 Score = 74.7 bits (182), Expect(2) = 8e-24
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +2

Query: 2    LIPRGSIPVWWRWYYWGCPVVWMLYGLVTSQFGDL 106
            ++PR  IP+WWRWYYWGCP+ W LYGLV SQFGDL
Sbjct: 1346 IVPRPRIPIWWRWYYWGCPIAWTLYGLVASQFGDL 1380



 Score = 60.5 bits (145), Expect(2) = 8e-24
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = +1

Query: 160  KEFLRTSFGFDHDMLPAIACVIVSFPVLFAFIFALSIRTFNFQTR 294
            ++FLR++FGF HD L  +A VIV+F V+FAF FAL I+ FNFQ R
Sbjct: 1392 EQFLRSNFGFKHDFLGVVAAVIVAFAVVFAFTFALGIKAFNFQRR 1436


>emb|CBI36226.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score = 73.6 bits (179), Expect(2) = 9e-23
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 2    LIPRGSIPVWWRWYYWGCPVVWMLYGLVTSQFGDL 106
            +IPR  IPVWWRWYYW CPV W LYGLVTSQ+GD+
Sbjct: 1447 IIPRTRIPVWWRWYYWACPVAWTLYGLVTSQYGDI 1481



 Score = 58.2 bits (139), Expect(2) = 9e-23
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = +1

Query: 160  KEFLRTSFGFDHDMLPAIACVIVSFPVLFAFIFALSIRTFNFQTR 294
            K++L   FGF+HD L  +A VIV F VLF FIFA SI+ FNFQ R
Sbjct: 1493 KQYLDDYFGFEHDFLGVVAAVIVGFTVLFLFIFAFSIKAFNFQRR 1537


>ref|XP_003632874.1| PREDICTED: pleiotropic drug resistance protein 1-like isoform 4
            [Vitis vinifera]
          Length = 1448

 Score = 73.6 bits (179), Expect(2) = 9e-23
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 2    LIPRGSIPVWWRWYYWGCPVVWMLYGLVTSQFGDL 106
            +IPR  IPVWWRWYYW CPV W LYGLVTSQ+GD+
Sbjct: 1358 IIPRTRIPVWWRWYYWACPVAWTLYGLVTSQYGDI 1392



 Score = 58.2 bits (139), Expect(2) = 9e-23
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = +1

Query: 160  KEFLRTSFGFDHDMLPAIACVIVSFPVLFAFIFALSIRTFNFQTR 294
            K++L   FGF+HD L  +A VIV F VLF FIFA SI+ FNFQ R
Sbjct: 1404 KQYLDDYFGFEHDFLGVVAAVIVGFTVLFLFIFAFSIKAFNFQRR 1448


>ref|XP_003632872.1| PREDICTED: pleiotropic drug resistance protein 1-like isoform 2
            [Vitis vinifera]
          Length = 1435

 Score = 73.6 bits (179), Expect(2) = 9e-23
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 2    LIPRGSIPVWWRWYYWGCPVVWMLYGLVTSQFGDL 106
            +IPR  IPVWWRWYYW CPV W LYGLVTSQ+GD+
Sbjct: 1345 IIPRTRIPVWWRWYYWACPVAWTLYGLVTSQYGDI 1379



 Score = 58.2 bits (139), Expect(2) = 9e-23
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = +1

Query: 160  KEFLRTSFGFDHDMLPAIACVIVSFPVLFAFIFALSIRTFNFQTR 294
            K++L   FGF+HD L  +A VIV F VLF FIFA SI+ FNFQ R
Sbjct: 1391 KQYLDDYFGFEHDFLGVVAAVIVGFTVLFLFIFAFSIKAFNFQRR 1435


>ref|XP_003632871.1| PREDICTED: pleiotropic drug resistance protein 1-like isoform 1
            [Vitis vinifera]
          Length = 1426

 Score = 73.6 bits (179), Expect(2) = 9e-23
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 2    LIPRGSIPVWWRWYYWGCPVVWMLYGLVTSQFGDL 106
            +IPR  IPVWWRWYYW CPV W LYGLVTSQ+GD+
Sbjct: 1336 IIPRTRIPVWWRWYYWACPVAWTLYGLVTSQYGDI 1370



 Score = 58.2 bits (139), Expect(2) = 9e-23
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = +1

Query: 160  KEFLRTSFGFDHDMLPAIACVIVSFPVLFAFIFALSIRTFNFQTR 294
            K++L   FGF+HD L  +A VIV F VLF FIFA SI+ FNFQ R
Sbjct: 1382 KQYLDDYFGFEHDFLGVVAAVIVGFTVLFLFIFAFSIKAFNFQRR 1426


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