BLASTX nr result

ID: Cimicifuga21_contig00040571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040571
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   169   2e-40
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              169   2e-40
emb|CAN64257.1| hypothetical protein VITISV_040149 [Vitis vinifera]   169   2e-40
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   167   1e-39
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ...   166   2e-39

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
           vinifera]
          Length = 2214

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/92 (84%), Positives = 83/92 (90%)
 Frame = -2

Query: 277 VCTACDFNRPGKTCLRTLEWVWRGETFAAKKSDYYHLKRQIESELVDKVDGQWSKSFLDL 98
           +CTACDFNRPGK CLR LEWVWRGE F AKKSDYYHLKRQIESELVD  D ++SKSF+DL
Sbjct: 622 ICTACDFNRPGKNCLRKLEWVWRGEAFMAKKSDYYHLKRQIESELVDGGDSRFSKSFIDL 681

Query: 97  PKTEQQAKLKDRLKKYCQKAYKRVLDKPVTEL 2
           PKTEQQ KLK+RLKKYCQKAYKRVLDKP TEL
Sbjct: 682 PKTEQQLKLKERLKKYCQKAYKRVLDKPATEL 713


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/92 (84%), Positives = 83/92 (90%)
 Frame = -2

Query: 277  VCTACDFNRPGKTCLRTLEWVWRGETFAAKKSDYYHLKRQIESELVDKVDGQWSKSFLDL 98
            +CTACDFNRPGK CLR LEWVWRGE F AKKSDYYHLKRQIESELVD  D ++SKSF+DL
Sbjct: 1096 ICTACDFNRPGKNCLRKLEWVWRGEAFMAKKSDYYHLKRQIESELVDGGDSRFSKSFIDL 1155

Query: 97   PKTEQQAKLKDRLKKYCQKAYKRVLDKPVTEL 2
            PKTEQQ KLK+RLKKYCQKAYKRVLDKP TEL
Sbjct: 1156 PKTEQQLKLKERLKKYCQKAYKRVLDKPATEL 1187


>emb|CAN64257.1| hypothetical protein VITISV_040149 [Vitis vinifera]
          Length = 1251

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/92 (84%), Positives = 83/92 (90%)
 Frame = -2

Query: 277 VCTACDFNRPGKTCLRTLEWVWRGETFAAKKSDYYHLKRQIESELVDKVDGQWSKSFLDL 98
           +CTACDFNRPGK CLR LEWVWRGE F AKKSDYYHLKRQIESELVD  D ++SKSF+DL
Sbjct: 91  ICTACDFNRPGKNCLRKLEWVWRGEAFMAKKSDYYHLKRQIESELVDGGDSRFSKSFIDL 150

Query: 97  PKTEQQAKLKDRLKKYCQKAYKRVLDKPVTEL 2
           PKTEQQ KLK+RLKKYCQKAYKRVLDKP TEL
Sbjct: 151 PKTEQQLKLKERLKKYCQKAYKRVLDKPATEL 182


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
           communis] gi|223531477|gb|EEF33309.1| DNA polymerase
           epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  167 bits (422), Expect = 1e-39
 Identities = 76/92 (82%), Positives = 82/92 (89%)
 Frame = -2

Query: 277 VCTACDFNRPGKTCLRTLEWVWRGETFAAKKSDYYHLKRQIESELVDKVDGQWSKSFLDL 98
           +CTACDFNRP KTCLR LEWVWRGE F A KSDYYHLK+QIESE VD +DGQ SK FLDL
Sbjct: 624 ICTACDFNRPDKTCLRKLEWVWRGEIFMANKSDYYHLKKQIESEFVDGIDGQLSKPFLDL 683

Query: 97  PKTEQQAKLKDRLKKYCQKAYKRVLDKPVTEL 2
           PK EQQ+KLK+RLKKYCQKAYKRV+DKPVTEL
Sbjct: 684 PKVEQQSKLKERLKKYCQKAYKRVIDKPVTEL 715


>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
           [Cucumis sativus]
          Length = 2051

 Score =  166 bits (419), Expect = 2e-39
 Identities = 78/92 (84%), Positives = 83/92 (90%)
 Frame = -2

Query: 277 VCTACDFNRPGKTCLRTLEWVWRGETFAAKKSDYYHLKRQIESELVDKVDGQWSKSFLDL 98
           VCTACDFNRPGKTCLR LEWVWRGE F AKKSDYYHLK+QIESE VD  + + SKSFL+L
Sbjct: 623 VCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIESEFVDSGNVRSSKSFLEL 682

Query: 97  PKTEQQAKLKDRLKKYCQKAYKRVLDKPVTEL 2
           PK EQQAKLKDRLKKYCQKAYKRVLDKPVTE+
Sbjct: 683 PKLEQQAKLKDRLKKYCQKAYKRVLDKPVTEV 714


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