BLASTX nr result

ID: Cimicifuga21_contig00040562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040562
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...    75   4e-12
ref|XP_003579203.1| PREDICTED: uncharacterized protein LOC100839...    71   8e-11
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    69   4e-10
gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indi...    69   4e-10
ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group] g...    68   7e-10

>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/89 (40%), Positives = 56/89 (62%)
 Frame = -1

Query: 267 FFRDLFTSNGTVLGNDLLEVVGAEISEADNVMLMKQVTSEEVWRTLAGIGSLKAPGPDGF 88
           FFRDL+T + ++   +LL +   +I++  N ML K  T EE+   L  IG LKAPGPDGF
Sbjct: 644 FFRDLYTKDESLNPGELLNMFEPKITDEMNGMLTKPFTDEEISDALFQIGPLKAPGPDGF 703

Query: 87  QAIFFKKGWSSIGPNFVQVIKSFFQTGSF 1
            A FF++ W  +  + ++ ++ FF+TG +
Sbjct: 704 PARFFQRNWGVLKRDVIEGVREFFETGEW 732


>ref|XP_003579203.1| PREDICTED: uncharacterized protein LOC100839353 [Brachypodium
           distachyon]
          Length = 1236

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/88 (36%), Positives = 56/88 (63%)
 Frame = -1

Query: 267 FFRDLFTSNGTVLGNDLLEVVGAEISEADNVMLMKQVTSEEVWRTLAGIGSLKAPGPDGF 88
           +F++LFT +  V    L++ + A++    N  L K+ T +E+   L  IG LKAPGPDGF
Sbjct: 5   YFKELFTRDDNVQPGPLIDCITAKVDGHMNQDLCKEFTDKEISDALFQIGPLKAPGPDGF 64

Query: 87  QAIFFKKGWSSIGPNFVQVIKSFFQTGS 4
            A FF++ W+++  + ++ +++FF TG+
Sbjct: 65  PARFFQRHWATVKKDIIRAVRNFFVTGA 92


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/88 (42%), Positives = 47/88 (53%)
 Frame = -1

Query: 267 FFRDLFTSNGTVLGNDLLEVVGAEISEADNVMLMKQVTSEEVWRTLAGIGSLKAPGPDGF 88
           FF+ LFTSNG      LL+VV  ++S A N  L  + T EEV   L  IG LKAPGPDG 
Sbjct: 648 FFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGM 707

Query: 87  QAIFFKKGWSSIGPNFVQVIKSFFQTGS 4
            A F+K  W  +G      +    + G+
Sbjct: 708 PAGFYKACWDVVGEKVTDEVLEVLRGGA 735


>gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indica Group]
          Length = 320

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/88 (42%), Positives = 47/88 (53%)
 Frame = -1

Query: 267 FFRDLFTSNGTVLGNDLLEVVGAEISEADNVMLMKQVTSEEVWRTLAGIGSLKAPGPDGF 88
           FF+ LFTSNG      LL+VV  ++S A N  L  + T EEV   L  IG LKAPGPDG 
Sbjct: 194 FFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGM 253

Query: 87  QAIFFKKGWSSIGPNFVQVIKSFFQTGS 4
            A F+K  W  +G      +    + G+
Sbjct: 254 PAGFYKACWDVVGEKVTDEVLEVLRGGA 281


>ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group]
           gi|255677700|dbj|BAH93889.1| Os07g0417700 [Oryza sativa
           Japonica Group]
          Length = 1011

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/87 (32%), Positives = 56/87 (64%)
 Frame = -1

Query: 267 FFRDLFTSNGTVLGNDLLEVVGAEISEADNVMLMKQVTSEEVWRTLAGIGSLKAPGPDGF 88
           +F++++T++ T+    ++ ++  +++   N  L ++ + EE+   +  IG LKAPGPDGF
Sbjct: 84  YFQEMYTADSTLDHTQIIHLIQEKVTPEMNESLCREFSEEEIATAVFQIGPLKAPGPDGF 143

Query: 87  QAIFFKKGWSSIGPNFVQVIKSFFQTG 7
            A F+++ W  +  + V+V+K+FF TG
Sbjct: 144 PARFYERNWGVLKEDIVRVVKTFFLTG 170


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