BLASTX nr result

ID: Cimicifuga21_contig00040535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040535
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330258.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002531443.1| serine-threonine protein kinase, plant-type,...    58   7e-07
ref|XP_002269212.2| PREDICTED: probable LRR receptor-like serine...    58   9e-07
ref|XP_002332969.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002332449.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002330258.1| predicted protein [Populus trichocarpa] gi|222871714|gb|EEF08845.1|
            predicted protein [Populus trichocarpa]
          Length = 1016

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2    FLCGPPLSKKCDNGNTEDVETITLVARLSEDHG-IDLTXXXXXXXXXXIVTIFGLIIVLY 178
            FLCGPPL   C     E+  ++ +     ED G ID+           IV + G+  VLY
Sbjct: 924  FLCGPPLQNNCSE---EESPSLPMPNDKQEDDGFIDMNFFYISLGVGYIVVVMGIAAVLY 980

Query: 179  INPYWRRMWFDFIDACLSVMFPF 247
            INPYWR  WF+FID C+   F F
Sbjct: 981  INPYWRCGWFNFIDYCIDTCFNF 1003


>ref|XP_002531443.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223528936|gb|EEF30930.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 912

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/76 (36%), Positives = 36/76 (47%)
 Frame = +2

Query: 5    LCGPPLSKKCDNGNTEDVETITLVARLSEDHGIDLTXXXXXXXXXXIVTIFGLIIVLYIN 184
            LCG PL K C           +  A   E + +D+              I G+ +VLYIN
Sbjct: 837  LCGLPLPKSCTEREASSAPRAS--AMDEESNFLDMNTFYGSFIVSYTFVIIGMFLVLYIN 894

Query: 185  PYWRRMWFDFIDACLS 232
            P WRR WFDF+D C+S
Sbjct: 895  PQWRRAWFDFVDICIS 910


>ref|XP_002269212.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g36180-like [Vitis vinifera]
          Length = 747

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   FLCGPPLSKKCDNGNTEDVETITLVARLSED--HGIDLTXXXXXXXXXXIVTIFGLIIVL 175
           FLCGP L +KC N +TE +++ +  ++ SE   + I+L           I+ + G   +L
Sbjct: 662 FLCGPMLKRKC-NTSTESLDSPSQSSQESEAKWYDINLVVFLATFVTSYIMILLGFATIL 720

Query: 176 YINPYWRRMWFDFID 220
           YINPYWR+ WF+FI+
Sbjct: 721 YINPYWRQRWFNFIE 735


>ref|XP_002332969.1| predicted protein [Populus trichocarpa] gi|222834328|gb|EEE72805.1|
            predicted protein [Populus trichocarpa]
          Length = 960

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2    FLCGPPLSKKCDNGNTEDVETITLVA--RLSEDHGIDLTXXXXXXXXXXIVTIFGLIIVL 175
            FLCGPPL   C    +E+  +  LV      +D  ID+            V +  + IVL
Sbjct: 868  FLCGPPLRNNC----SEEAVSSQLVPDDEQGDDGFIDIDFFYISFGVCYTVVVMTIAIVL 923

Query: 176  YINPYWRRMWFDFIDACLSVMFPF 247
            YINPYWRR W  FI+ C+   + F
Sbjct: 924  YINPYWRRRWLYFIEDCIDTCYYF 947


>ref|XP_002332449.1| predicted protein [Populus trichocarpa] gi|222833065|gb|EEE71542.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2   FLCGPPLSKKCDNGNTEDVETITLVA--RLSEDHGIDLTXXXXXXXXXXIVTIFGLIIVL 175
           FLCGPPL   C    +E+  +  LV      +D  ID+            V +  + IVL
Sbjct: 553 FLCGPPLRNNC----SEEAVSSQLVPDDEQGDDGFIDIDFFYISFGVCYTVVVMTIAIVL 608

Query: 176 YINPYWRRMWFDFIDACLSVMFPF 247
           YINPYWRR W  FI+ C+   + F
Sbjct: 609 YINPYWRRRWLYFIEDCIDTCYYF 632


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