BLASTX nr result

ID: Cimicifuga21_contig00040507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040507
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21278.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_003564985.1| PREDICTED: uncharacterized protein LOC100833...    71   1e-10
dbj|BAJ99548.1| predicted protein [Hordeum vulgare subsp. vulgare]     69   4e-10
ref|XP_003567706.1| PREDICTED: uncharacterized protein LOC100842...    69   5e-10
tpg|DAA56018.1| TPA: hypothetical protein ZEAMMB73_726231 [Zea m...    68   7e-10

>emb|CBI21278.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
 Frame = +2

Query: 2   GLPVVCGGFELSRNSMV--ELTVFSHMVS--GVQGLKIEICPKKGEVWAVFEDWRPFEWC 169
           GLPVVCG F + RN  V  E   FSHM++       +++I P+ G++WA+++DW+PFEWC
Sbjct: 342 GLPVVCGFFNVDRNETVVTEPKKFSHMINCFASPNEQLQIYPQNGDIWAMYKDWKPFEWC 401

Query: 170 KDPATRKGCGYRMVEILVDYSKHAGLTVAHL 262
            +P  RKGC  RMVEI+   S   G+  A L
Sbjct: 402 SNPEARKGCILRMVEIIAGCSNPTGVMAAGL 432



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
 Frame = +2

Query: 5   LPVVCGGFELSRNSM-VELTVFSHMVS---GVQGLKIEICPKKGEVWAVFEDWRPFEWCK 172
           LP VCG F   + ++ + ++ FSHMV       G    I PKKGE+WA++ +W   +W +
Sbjct: 590 LPFVCGSFRAGKTTINLGMSRFSHMVKCEYSTNGFSYGIYPKKGEIWAMYRNWNS-KWKQ 648

Query: 173 DPATRKGCGYRMVEILVDYSKHAGLTVAHL 262
              +   C   +VEI+ D+S+ +GL  A L
Sbjct: 649 SDLSYYQC--CIVEIVTDFSEESGLMAARL 676


>ref|XP_003564985.1| PREDICTED: uncharacterized protein LOC100833870 [Brachypodium
           distachyon]
          Length = 780

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
 Frame = +2

Query: 5   LPVVCGGF--ELSRNSMVELTVFSHMVSGVQ-GLKIEICPKKGEVWAVFEDWRPFEWCKD 175
           LP VCG F  E  + S+   ++FSH +SG      +E+ P+KGEVWA++ DW    W  +
Sbjct: 365 LPFVCGTFIAEERQMSLTCPSMFSHEISGDNLNQHLEVYPRKGEVWAIYNDW-DIGWYNN 423

Query: 176 PATRKGCGYRMVEILVDYSKHAGLTVAHL 262
           P  RK   + +VEIL  YS+H+G TVA L
Sbjct: 424 PEMRKKSTFSVVEILTSYSEHSGCTVALL 452


>dbj|BAJ99548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 748

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
 Frame = +2

Query: 5   LPVVCGGF--ELSRNSMVELTVFSHMVSGVQ-GLKIEICPKKGEVWAVFEDWRPFEWCKD 175
           LP VCG F  E  + S+  L++FSH +S       +E+ P++GE WA++ DW    WC +
Sbjct: 338 LPFVCGTFIAEERQMSLSSLSMFSHEISCDNVNQHLELYPRRGEAWAIYSDW-DIGWCSN 396

Query: 176 PATRKGCGYRMVEILVDYSKHAGLTVAHL 262
           P  RK   +  VEIL  YS+ +G TVA L
Sbjct: 397 PEMRKKSAFSAVEILTSYSEDSGCTVAPL 425


>ref|XP_003567706.1| PREDICTED: uncharacterized protein LOC100842436 [Brachypodium
           distachyon]
          Length = 993

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = +2

Query: 5   LPVVCGGFELSRNSM-VELTVFSHMVSGVQGLK---IEICPKKGEVWAVFEDWRPFEWCK 172
           LPV CG F L +  +  ++ +FSH+V  V+G K    EI P KGE WA+++ W   +W  
Sbjct: 546 LPVACGNFILGKTEVSTDVQIFSHIVPWVKGKKRSTYEIYPGKGEAWAIYKGWS-MQWSS 604

Query: 173 DPATRKGCGYRMVEILVDYSKHAGLTVAHL 262
           D    K   Y +VEIL D++  AG++VA L
Sbjct: 605 DADNHKTYEYDLVEILSDFTMEAGVSVAPL 634


>tpg|DAA56018.1| TPA: hypothetical protein ZEAMMB73_726231 [Zea mays]
          Length = 762

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
 Frame = +2

Query: 2   GLPVVCGGF--ELSRNSMVELTVFSHMVSGVQ-GLKIEICPKKGEVWAVFEDWRPFEWCK 172
           GLP+VCG F  +  R S+   T+F H +S       +E+ P++GE+WA++ +W    W  
Sbjct: 345 GLPLVCGTFVADEHRISLTCPTMFCHQISNNNMNQDLEVYPQEGEIWAIYRNW-DIGWYT 403

Query: 173 DPATRKGCGYRMVEILVDYSKHAGLTVAHL 262
           DP   K   + +VEIL  YS  +G TVAHL
Sbjct: 404 DPRMWKNSDFSIVEILTSYSNESGYTVAHL 433


Top