BLASTX nr result

ID: Cimicifuga21_contig00040485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040485
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC77009.1| hypothetical protein OsI_15342 [Oryza sativa Indi...    88   8e-16
gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japo...    87   1e-15
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...    87   1e-15
gb|EEC84131.1| hypothetical protein OsI_30475 [Oryza sativa Indi...    86   4e-15
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    85   5e-15

>gb|EEC77009.1| hypothetical protein OsI_15342 [Oryza sativa Indica Group]
          Length = 815

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/81 (48%), Positives = 54/81 (66%)
 Frame = -1

Query: 244 GDLNDIGSAKEKKGGKPPSAYKMHGFHQFLQSCGLMDLGFRGPAFTWSNKQHGWRLIRKR 65
           GDLN+I    EK G  PP+  +++ F  ++ + GLMDLG+ GPA+TWSNKQHG  L+ +R
Sbjct: 2   GDLNEIMHVNEKFGSVPPNQVRINIFKHYVNNIGLMDLGYNGPAYTWSNKQHGKDLVLQR 61

Query: 64  LDRAVGNACWRVQFPMASVNH 2
           LDR + N  W + FP  +V H
Sbjct: 62  LDRCLANVEWCMNFPNTTVYH 82


>gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japonica Group]
          Length = 915

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -1

Query: 262 QPWLVCGDLNDIGSAKEKKGGKPPSAYKMHGFHQFLQSCGLMDLGFRGPAFTWSNKQHGW 83
           QPWL+ GD N+I  A EK+GG+P    +M  F   L  CGL+D+GF G  FTW N  H  
Sbjct: 362 QPWLMAGDFNEILVAAEKQGGRPKCQAQMDKFRDTLADCGLIDIGFEGDMFTWRNNSHTE 421

Query: 82  R-LIRKRLDRAVGNACWRVQFP 20
              IR+ LDRAV N  WRV+FP
Sbjct: 422 EGYIREHLDRAVANQEWRVKFP 443


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
           gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
           Japonica Group]
          Length = 1453

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -1

Query: 262 QPWLVCGDLNDIGSAKEKKGGKPPSAYKMHGFHQFLQSCGLMDLGFRGPAFTWSNKQHGW 83
           QPWL+ GD N+I  A EK+GG+P    +M  F   L  CGL+D+GF G  FTW N  H  
Sbjct: 399 QPWLMAGDFNEILVAAEKQGGRPKCQAQMDKFRDTLADCGLIDIGFEGDMFTWRNNSHTE 458

Query: 82  R-LIRKRLDRAVGNACWRVQFP 20
              IR+ LDRAV N  WRV+FP
Sbjct: 459 EGYIREHLDRAVANQEWRVKFP 480


>gb|EEC84131.1| hypothetical protein OsI_30475 [Oryza sativa Indica Group]
          Length = 296

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = -1

Query: 280 LKVPLDQPWLVCGDLNDIGSAKEKKGGKPPSAYKMHGFHQFLQSCGLMDLGFRGPAFTWS 101
           LK  +  PW+V G+ N+I  + EK GG   S   MH F   L+ C L DLGF G AFTW 
Sbjct: 74  LKTQMALPWVVSGNFNEILFSCEKVGGSQRSESLMHNFRDALEECDLHDLGFVGDAFTWR 133

Query: 100 NKQHGWRL-IRKRLDRAVGNACWRVQFPMASV 8
           N  H   + I++RLDRAV N  WR +FP+  V
Sbjct: 134 NNHHDVHMYIKERLDRAVANGLWRSRFPLVRV 165


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/85 (50%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = -1

Query: 259 PWLVCGDLNDIGSAKEKKGGKPPSAYKMHGFHQFLQSCGLMDLGFRGPAFTWSNKQHGWR 80
           PWL+ GD N+I  + EK+GG+  +   M  F   L  CGL DLGF G AFTW N  H   
Sbjct: 377 PWLMAGDFNEILFSHEKQGGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQE 436

Query: 79  -LIRKRLDRAVGNACWRVQFPMASV 8
             IR+RLDRAV N  WR  FP A V
Sbjct: 437 GYIRERLDRAVANPEWRAMFPAARV 461


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