BLASTX nr result

ID: Cimicifuga21_contig00040478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040478
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541078.1| PREDICTED: receptor-like serine/threonine-pr...    99   5e-19
ref|XP_003541077.1| PREDICTED: G-type lectin S-receptor-like ser...    99   5e-19
emb|CAN73202.1| hypothetical protein VITISV_023204 [Vitis vinifera]    97   1e-18
ref|XP_003635263.1| PREDICTED: LOW QUALITY PROTEIN: G-type lecti...    94   9e-18
ref|XP_002892638.1| S-locus lectin protein kinase family protein...    94   1e-17

>ref|XP_003541078.1| PREDICTED: receptor-like serine/threonine-protein kinase SD1-7-like
           [Glycine max]
          Length = 777

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
 Frame = -3

Query: 296 GNLVIFDGRQTTVWSTNVSVAANSSEAVLLNTGNLVLR-EKDSNGSTYLWQSFDYPSNVF 120
           G LV+ +   T +WSTN +  A+   A LL++GNLVLR EKD+N   YLWQSFDYPS+ F
Sbjct: 97  GYLVLINQNNTVIWSTNTTTKASLVVAQLLDSGNLVLRDEKDTNPENYLWQSFDYPSDTF 156

Query: 119 IAYMQMWMDTRTRVQHTITSWKSDDDPSPGNFTFVIAY 6
           +  M++  D +  +   +T+WK+ DDPSPG+FT  I +
Sbjct: 157 LPGMKLGWDLKKGLNRVLTAWKNWDDPSPGDFTLSILH 194


>ref|XP_003541077.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At4g27290-like [Glycine max]
          Length = 824

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = -3

Query: 296 GNLVIFDGRQTTVWSTNVSVAANSSEAVLLNTGNLVLR-EKDSNGSTYLWQSFDYPSNVF 120
           GNLV+ +   T +WSTN +  A+   A LL++GNLVLR EKD+N   YLWQSFDYPS+ F
Sbjct: 97  GNLVLVNQNNTVIWSTNTTAKASLVVAQLLDSGNLVLRDEKDTNPENYLWQSFDYPSDTF 156

Query: 119 IAYMQMWMDTRTRVQHTITSWKSDDDPSPGNFT 21
           +  M++  D +  +   +T+WK+ DDPSPG+FT
Sbjct: 157 LPGMKLGWDLKKGLNWFLTAWKNWDDPSPGDFT 189


>emb|CAN73202.1| hypothetical protein VITISV_023204 [Vitis vinifera]
          Length = 663

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/83 (55%), Positives = 62/83 (74%)
 Frame = -3

Query: 269 QTTVWSTNVSVAANSSEAVLLNTGNLVLREKDSNGSTYLWQSFDYPSNVFIAYMQMWMDT 90
           Q   WST VS  +N S   LL++GNLVLRE DSNGS ++WQSFDYPS+ F+  M++ ++ 
Sbjct: 3   QNLTWSTVVSSVSNGSIVELLDSGNLVLREGDSNGS-FIWQSFDYPSDCFLQNMKVGLNL 61

Query: 89  RTRVQHTITSWKSDDDPSPGNFT 21
           +T  +  +TSW+SD+DPSPGNFT
Sbjct: 62  KTGEKRFLTSWRSDNDPSPGNFT 84


>ref|XP_003635263.1| PREDICTED: LOW QUALITY PROTEIN: G-type lectin S-receptor-like
           serine/threonine-protein kinase At1g61480-like [Vitis
           vinifera]
          Length = 630

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/99 (44%), Positives = 69/99 (69%)
 Frame = -3

Query: 305 GGDGNLVIFDGRQTTVWSTNVSVAANSSEAVLLNTGNLVLREKDSNGSTYLWQSFDYPSN 126
           G DGNL++ D  Q +VWSTNVS  +N+S AVLL+ G+ VL+   S    +LW+SF++P +
Sbjct: 99  GSDGNLMLVDSMQNSVWSTNVSALSNNSTAVLLDDGDFVLKHCISG--EFLWESFNHPCD 156

Query: 125 VFIAYMQMWMDTRTRVQHTITSWKSDDDPSPGNFTFVIA 9
            F+  M++ M+ +T  + ++ SW+++DDPSP NF+  IA
Sbjct: 157 TFLPNMKIGMNIKTGERRSLASWQTEDDPSPRNFSLGIA 195


>ref|XP_002892638.1| S-locus lectin protein kinase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338480|gb|EFH68897.1| S-locus
           lectin protein kinase family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 830

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
 Frame = -3

Query: 299 DGNLVIFDGRQTTVWSTNVSV--AANSSEAVLLNTGNLVLREKDSNGSTYLWQSFDYPSN 126
           +GNLV+ DGR    WSTNVSV  AAN++ A LLNTGNLVL    ++G   +W+SF++P N
Sbjct: 93  EGNLVVMDGRGQVHWSTNVSVPVAANTTYARLLNTGNLVLLGTTNSGDDIIWESFEHPQN 152

Query: 125 VFIAYMQMWMDTRTRVQHTITSWKSDDDPSPGNFT 21
           +++  M++  D +T     + SWKS  DPSPG ++
Sbjct: 153 IYLPTMRLATDAKTGRSLKLRSWKSPSDPSPGRYS 187


Top