BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040459
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprot...    52   4e-14
dbj|BAF01788.1| putative Ty3-gypsy-like retroelement pol polypro...    52   5e-14
emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]    56   1e-13
emb|CAN79395.1| hypothetical protein VITISV_010430 [Vitis vinifera]    65   6e-13
ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]       55   8e-12

>gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 280

 Score = 51.6 bits (122), Expect(2) = 4e-14
 Identities = 27/60 (45%), Positives = 37/60 (61%)
 Frame = -3

Query: 188 PVPILKKINDNAYVIDLPDQLTTSKSFNVIDLYAYHGADEMGLPSVDSWASPFKDGETDV 9
           P  +L+KINDNAYV+ LP  +  S +FNV D++ YH AD +  P  +   S  +  ETDV
Sbjct: 219 PFKVLRKINDNAYVVALPKSMNISNTFNVADIHEYH-ADGVLYPEENLRTSSSEVEETDV 277



 Score = 50.8 bits (120), Expect(2) = 4e-14
 Identities = 29/61 (47%), Positives = 36/61 (59%)
 Frame = -1

Query: 349 VKLSLEKVNAKYKESANKHRRLKSFEEGDLVTVHLRKERPPSGTCNKLKAKKIAQFLFLK 170
           VK  LE    K K +A+K RR K F+EGD V V LRK R   GT NK+K +K   F  L+
Sbjct: 165 VKAKLEATGKKNKVAADKRRRFKVFKEGDDVMVLLRKGRFAVGTYNKVKPRKYGPFKVLR 224

Query: 169 R 167
           +
Sbjct: 225 K 225


>dbj|BAF01788.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 127

 Score = 51.6 bits (122), Expect(2) = 5e-14
 Identities = 27/60 (45%), Positives = 37/60 (61%)
 Frame = -3

Query: 188 PVPILKKINDNAYVIDLPDQLTTSKSFNVIDLYAYHGADEMGLPSVDSWASPFKDGETDV 9
           P  +L+KINDNAYV+ LP  +  S +FNV D++ YH AD +  P  +   S  +  ETDV
Sbjct: 66  PFKVLRKINDNAYVVALPKSMNISNTFNVADIHEYH-ADGVLYPEENLRTSSSEVEETDV 124



 Score = 50.8 bits (120), Expect(2) = 5e-14
 Identities = 29/61 (47%), Positives = 36/61 (59%)
 Frame = -1

Query: 349 VKLSLEKVNAKYKESANKHRRLKSFEEGDLVTVHLRKERPPSGTCNKLKAKKIAQFLFLK 170
           VK  LE    K K +A+K RR K F+EGD V V LRK R   GT NK+K +K   F  L+
Sbjct: 12  VKAKLEATGKKNKVAADKRRRFKVFKEGDDVMVLLRKGRFAVGTYNKVKPRKYGPFKVLR 71

Query: 169 R 167
           +
Sbjct: 72  K 72


>emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]
          Length = 866

 Score = 55.8 bits (133), Expect(2) = 1e-13
 Identities = 32/61 (52%), Positives = 39/61 (63%)
 Frame = -1

Query: 349 VKLSLEKVNAKYKESANKHRRLKSFEEGDLVTVHLRKERPPSGTCNKLKAKKIAQFLFLK 170
           VK +LEKVN  YK  A++H+RLK F EGDLV V+LRK   P  TC    A KI  F  L+
Sbjct: 750 VKKNLEKVNLHYKIVADQHQRLKLFNEGDLVMVYLRKNHFP--TCTYNNAYKIGPFRVLQ 807

Query: 169 R 167
           +
Sbjct: 808 K 808



 Score = 45.1 bits (105), Expect(2) = 1e-13
 Identities = 20/43 (46%), Positives = 28/43 (65%)
 Frame = -3

Query: 188 PVPILKKINDNAYVIDLPDQLTTSKSFNVIDLYAYHGADEMGL 60
           P  +L+KI DNAY IDL   +  S +FNV+D++ Y  +DE  L
Sbjct: 802 PFRVLQKIGDNAYKIDLLADINISNTFNVVDVFEYFPSDEFSL 844


>emb|CAN79395.1| hypothetical protein VITISV_010430 [Vitis vinifera]
          Length = 391

 Score = 65.1 bits (157), Expect(2) = 6e-13
 Identities = 35/61 (57%), Positives = 41/61 (67%)
 Frame = -1

Query: 349 VKLSLEKVNAKYKESANKHRRLKSFEEGDLVTVHLRKERPPSGTCNKLKAKKIAQFLFLK 170
           VK +LEKVN  YK ++++HR LK F EGDLV VH  K   P GT NKLK KKI  F  LK
Sbjct: 268 VKKNLEKVNLCYKTASDRHRCLKLFNEGDLVMVHFCKNCFPIGTYNKLKDKKIGPFRVLK 327

Query: 169 R 167
           +
Sbjct: 328 K 328



 Score = 33.5 bits (75), Expect(2) = 6e-13
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -3

Query: 188 PVPILKKINDNAYVIDLPDQLTTSKSFNVIDLY 90
           P  +LKKI D AY IDL   +  S +FN+ +++
Sbjct: 322 PFRVLKKIGDKAYKIDLLANMNISNTFNIANIF 354


>ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]
          Length = 962

 Score = 55.5 bits (132), Expect(2) = 8e-12
 Identities = 26/57 (45%), Positives = 40/57 (70%)
 Frame = -1

Query: 337 LEKVNAKYKESANKHRRLKSFEEGDLVTVHLRKERPPSGTCNKLKAKKIAQFLFLKR 167
           L++    YK++A++ RR  +F EGDLV +HLRK R P+GT NKLK +++  F  L++
Sbjct: 322 LKESTQSYKKAADRKRRQATFTEGDLVMIHLRKIRFPTGTYNKLKDRQLGPFRVLEK 378



 Score = 39.3 bits (90), Expect(2) = 8e-12
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
 Frame = -3

Query: 188 PVPILKKINDNAYVIDLPDQLTTSKSFNVID-------LYAYHGADEMGLPSVD 48
           P  +L+KI DNAY I+LP  L     FNV D       LY + G + + LP  D
Sbjct: 372 PFRVLEKIGDNAYRIELPLDLNVHPIFNVADLKQYSSRLYIFQGPNHLMLPESD 425