BLASTX nr result

ID: Cimicifuga21_contig00040447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040447
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609855.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   110   9e-23
ref|XP_002883058.1| hypothetical protein ARALYDRAFT_479214 [Arab...   100   1e-19
gb|AAM61614.1| unknown [Arabidopsis thaliana]                         100   1e-19
ref|XP_004168358.1| PREDICTED: BTB/POZ and MATH domain-containin...   100   2e-19
ref|XP_004138521.1| PREDICTED: BTB/POZ and MATH domain-containin...   100   2e-19

>ref|XP_003609855.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355510910|gb|AES92052.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 311

 Score =  110 bits (276), Expect = 9e-23
 Identities = 48/94 (51%), Positives = 64/94 (68%)
 Frame = -1

Query: 287 QIHGQYLALEDSNGRGGRFHAMKTEWGFAEFMPLATFNDSVNGYLMNDVCVFGVEVFVCK 108
           Q +  YL L+D   +  RFH MK EWGF +F+PL  FN    GYL++D+C FG EVFVC+
Sbjct: 97  QNNDNYLVLQDDVKKEKRFHRMKVEWGFDQFIPLKDFNIGSKGYLLDDICAFGAEVFVCR 156

Query: 107 ERVTGKGESLSLIRGAIPYKHTWKVMRTPQLDEE 6
           E  TGKGESL +++ A+PYKH W++    +LD E
Sbjct: 157 ENYTGKGESLIMMKDALPYKHVWEIKDFSKLDSE 190


>ref|XP_002883058.1| hypothetical protein ARALYDRAFT_479214 [Arabidopsis lyrata subsp.
           lyrata] gi|297328898|gb|EFH59317.1| hypothetical protein
           ARALYDRAFT_479214 [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  100 bits (250), Expect = 1e-19
 Identities = 47/89 (52%), Positives = 62/89 (69%)
 Frame = -1

Query: 272 YLALEDSNGRGGRFHAMKTEWGFAEFMPLATFNDSVNGYLMNDVCVFGVEVFVCKERVTG 93
           YL L+   G   RFHA+K EWGF +F+P  TF+D+ NGYLM D C+FG +VFV KER +G
Sbjct: 104 YLILQ---GNERRFHAVKREWGFDKFIPTGTFSDASNGYLMEDTCMFGADVFVSKERRSG 160

Query: 92  KGESLSLIRGAIPYKHTWKVMRTPQLDEE 6
           +GE LS+I+ A   KH WK+    +LD+E
Sbjct: 161 RGECLSMIKDATSSKHVWKIENFSKLDKE 189


>gb|AAM61614.1| unknown [Arabidopsis thaliana]
          Length = 309

 Score =  100 bits (250), Expect = 1e-19
 Identities = 47/89 (52%), Positives = 62/89 (69%)
 Frame = -1

Query: 272 YLALEDSNGRGGRFHAMKTEWGFAEFMPLATFNDSVNGYLMNDVCVFGVEVFVCKERVTG 93
           YL L+   G   RFH++K EWGF +F+P  TF+DS NGYLM D C+FG +VFV KER +G
Sbjct: 104 YLILQ---GNERRFHSVKREWGFDKFIPTGTFSDSSNGYLMEDTCMFGADVFVSKERRSG 160

Query: 92  KGESLSLIRGAIPYKHTWKVMRTPQLDEE 6
           +GE LS+I+ A   KH WK+    +LD+E
Sbjct: 161 RGECLSMIKDATSSKHVWKIENFSKLDKE 189


>ref|XP_004168358.1| PREDICTED: BTB/POZ and MATH domain-containing protein 3-like
           [Cucumis sativus]
          Length = 316

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
 Frame = -1

Query: 272 YLALEDSNGRGGRFHAMKTEWGFAEFMPLATFNDSVNGYLMNDVCVFGVEVFVCKERVT- 96
           YL +ED   +  RF  MK +WGF +++ L  F +S NGYL++DVCVFG EVFVCKE    
Sbjct: 106 YLTVEDGKWKPRRFRGMKKQWGFDKYISLKEFKESSNGYLVDDVCVFGAEVFVCKENFKG 165

Query: 95  GKGESLSLIRGAIPYKHTWKVMRTPQLDEE 6
           GKGE LS+I+  + YKH WK+    +LD E
Sbjct: 166 GKGECLSMIKSPVTYKHVWKIDNFSKLDAE 195


>ref|XP_004138521.1| PREDICTED: BTB/POZ and MATH domain-containing protein 3-like
           [Cucumis sativus]
          Length = 316

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
 Frame = -1

Query: 272 YLALEDSNGRGGRFHAMKTEWGFAEFMPLATFNDSVNGYLMNDVCVFGVEVFVCKERVT- 96
           YL +ED   +  RF  MK +WGF +++ L  F +S NGYL++DVCVFG EVFVCKE    
Sbjct: 106 YLTVEDGKWKPRRFRGMKKQWGFDKYISLKEFKESSNGYLVDDVCVFGAEVFVCKENFKG 165

Query: 95  GKGESLSLIRGAIPYKHTWKVMRTPQLDEE 6
           GKGE LS+I+  + YKH WK+    +LD E
Sbjct: 166 GKGECLSMIKSPVTYKHVWKIDNFSKLDAE 195


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