BLASTX nr result

ID: Cimicifuga21_contig00040428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040428
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO73529.1| gag-pol polyprotein [Glycine max]                       61   8e-08
gb|AAC64917.1| gag-pol polyprotein [Glycine max]                       61   1e-07
gb|AAO73525.1| gag-pol polyprotein [Glycine max]                       60   2e-07
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                       60   2e-07
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                       59   4e-07

>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
 Frame = -1

Query: 289 EGHNVQFSYDHYKVIDEN*AILIHGMRDRDNCYSIIPDNSSKA---LLTRTDEIKLWHRR 119
           EG NV F+     V +E   +L+ G R +DNCY   P  SS +   L ++ DE+K+WH+R
Sbjct: 637 EGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQESSHSSTCLFSKEDEVKIWHQR 696

Query: 118 LGHINYKNIYFLASKEIVR-----QLNEGKL 41
            GH++ + +  +  K  VR     ++ EG++
Sbjct: 697 FGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 727


>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
          Length = 1550

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
 Frame = -1

Query: 289 EGHNVQFSYDHYKVIDEN*AILIHGMRDRDNCYSIIPDN---SSKALLTRTDEIKLWHRR 119
           EG NV F+     V +E   +L+ G R +DNCY   P     SS  L ++ DE+K+WH+R
Sbjct: 610 EGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLFSKEDEVKIWHQR 669

Query: 118 LGHINYKNIYFLASKEIVR-----QLNEGKL 41
            GH++ + +  +  K  VR     ++ EG++
Sbjct: 670 FGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 700


>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
 Frame = -1

Query: 289 EGHNVQFSYDHYKVIDEN*AILIHGMRDRDNCYSIIPDN---SSKALLTRTDEIKLWHRR 119
           EG NV F+     V +E   +L+ G R +DNCY   P     SS  L ++ DE+K+WH+R
Sbjct: 636 EGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVKIWHQR 695

Query: 118 LGHINYKNIYFLASKEIVR-----QLNEGKL 41
            GH++ + +  +  K  VR     ++ EG++
Sbjct: 696 FGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 726


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
 Frame = -1

Query: 289 EGHNVQFSYDHYKVIDEN*AILIHGMRDRDNCYSIIPDN---SSKALLTRTDEIKLWHRR 119
           EG NV F+     V +E   +L+ G R +DNCY   P     SS  L ++ DE+++WH+R
Sbjct: 636 EGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQR 695

Query: 118 LGHINYKNIYFLASKEIVR-----QLNEGKL 41
            GH++ + +  +  K  VR     ++ EG++
Sbjct: 696 FGHLHLRGMKKILDKSAVRGIPNLKIEEGRI 726


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
 Frame = -1

Query: 289 EGHNVQFSYDHYKVIDEN*AILIHGMRDRDNCYSIIPDN---SSKALLTRTDEIKLWHRR 119
           EG NV F+     V +E   +L+ G R +DNCY   P     SS  L ++ DE+++WH+R
Sbjct: 634 EGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQR 693

Query: 118 LGHINYKNIYFLASKEIVR-----QLNEGKL 41
            GH++ + +  +  K  VR     ++ EG++
Sbjct: 694 FGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 724


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