BLASTX nr result

ID: Cimicifuga21_contig00040413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040413
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...   179   2e-43
emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]   173   1e-41
ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ric...   169   2e-40
ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38
ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/162 (54%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
 Frame = -2

Query: 523 AAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPDVCMHALHDNQQARNNNDFNGGDT--H 350
           AAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPP+VC  AL ++QQ +N    NGGD   H
Sbjct: 119 AAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCFQALQESQQIQNTGGINGGDKVHH 178

Query: 349 HVMQPNNFDIPEVIFEHLKSNQGVLTYAPPLPDISIGSMLHQGLAPSQNYSFMSTSTMHR 170
            ++Q N+++IP+VI +  K+NQ    Y P  P++S  SML +G   SQ   FM+  TMHR
Sbjct: 179 DLLQTNSYEIPDVILDGFKANQDAFPYVPDFPNLSTSSMLMKGFGSSQYCGFMA-PTMHR 237

Query: 169 PKRLRGPEMLFPGFN--NELPLIDHFQNDNRGKVSPNFGLSF 50
            KR+R    LFPG+N  N +PL D  Q+D   K++ +FGL +
Sbjct: 238 QKRVRESPALFPGYNERNGIPLFDQIQDDTGDKIAQSFGLPY 279


>emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]
          Length = 455

 Score =  173 bits (439), Expect = 1e-41
 Identities = 85/159 (53%), Positives = 109/159 (68%), Gaps = 4/159 (2%)
 Frame = -2

Query: 514 LPGRTDNEIKNYWNTRIKRRQRAGLPLYPPDVCMHALHDNQQARNNNDFNGGDT--HHVM 341
           LPGRTDNEIKNYWNTRIKRRQRAGLPLYPP+VC  AL ++QQ +N    NGGD   H ++
Sbjct: 18  LPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCFQALQESQQIQNTGGINGGDKVHHDLL 77

Query: 340 QPNNFDIPEVIFEHLKSNQGVLTYAPPLPDISIGSMLHQGLAPSQNYSFMSTSTMHRPKR 161
           Q N+++IP+VI +  K+NQ    Y P  P++S  SML +G   SQ   FM+  TMHR KR
Sbjct: 78  QTNSYEIPDVILDGFKANQDAFPYVPDFPNLSTSSMLMKGFGSSQYCGFMA-PTMHRQKR 136

Query: 160 LRGPEMLFPGFN--NELPLIDHFQNDNRGKVSPNFGLSF 50
           +R    LFPG+N  N +PL D  Q+D   K++ +FGL +
Sbjct: 137 VRESPALFPGYNERNGIPLFDQIQDDTGDKIAQSFGLPY 175


>ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223535153|gb|EEF36833.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 556

 Score =  169 bits (428), Expect = 2e-40
 Identities = 89/164 (54%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
 Frame = -2

Query: 523 AAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPDVCMHALHDNQQARNNNDFNGGDTHH- 347
           AAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPP+V   AL ++ Q       N GD  H 
Sbjct: 119 AAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVSFQALQESHQGLTIGGINTGDKVHG 178

Query: 346 -VMQPNNFDIPEVIFEHLKSNQGVLTYAPPLPDISIGSMLHQGLAPSQNYSFMSTSTMHR 170
            +++ N ++IP+VIF+ LK++QG+  Y P L DI+  SML +GL+ SQ  SFMS S  HR
Sbjct: 179 DLLRNNGYEIPDVIFDSLKASQGISPYVPELADITTSSMLIKGLSSSQYGSFMSPSA-HR 237

Query: 169 PKRLRGPEMLFPGFN----NELPLIDHFQNDNRGKVSPNFGLSF 50
            KRLR      PG++    +E PL D FQ+++  KV+ +FGLSF
Sbjct: 238 QKRLRESTTFIPGYSGNIKSEFPLFDQFQDESCDKVAQSFGLSF 281


>ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|222842254|gb|EEE79801.1|
           predicted protein [Populus trichocarpa]
          Length = 558

 Score =  164 bits (414), Expect = 1e-38
 Identities = 88/164 (53%), Positives = 112/164 (68%), Gaps = 6/164 (3%)
 Frame = -2

Query: 523 AAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPDVCMHALHDNQQARNNNDFNGGD--TH 350
           AAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPP+V +  L  +QQ  + N  + G+   H
Sbjct: 118 AAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVSLQTLQGSQQCLDINGMDSGNKGQH 177

Query: 349 HVMQPNNFDIPEVIFEHLKSNQGVLTYAPPLPDISIGSMLHQGLAPSQNYSFMSTSTMHR 170
            ++Q +N+ IP+V+F++LK+N+ +L Y P LPDIS  S+L +GL  SQ  SFMS  TMHR
Sbjct: 178 DILQTHNYGIPDVMFDNLKTNRSILPYVPELPDISASSILMKGLCSSQYGSFMS-PTMHR 236

Query: 169 PKRLRGPEMLFPGFN----NELPLIDHFQNDNRGKVSPNFGLSF 50
            KRLR    L   F+    N+  L D FQ+ +  K +  FGLSF
Sbjct: 237 QKRLREATTLLSSFSGGMKNDFHLFDQFQDGD--KAAQYFGLSF 278


>ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|222844961|gb|EEE82508.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score =  150 bits (378), Expect = 1e-34
 Identities = 83/164 (50%), Positives = 104/164 (63%), Gaps = 6/164 (3%)
 Frame = -2

Query: 523 AAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPDVCMHALHDNQQARNNN--DFNGGDTH 350
           AAHLPGRTDNEIKNYWNTRIKR QRAGLPLYPP+  + AL ++Q+  N +  +      H
Sbjct: 118 AAHLPGRTDNEIKNYWNTRIKRHQRAGLPLYPPEASLQALQESQRCLNIDRIEIRNKSQH 177

Query: 349 HVMQPNNFDIPEVIFEHLKSNQGVLTYAPPLPDISIGSMLHQGLAPSQNYSFMSTSTMHR 170
             +Q N++ IP V+F++L  +Q +L Y P LPDI+  SML +GL+  Q  SFMS   MHR
Sbjct: 178 DTLQSNSYGIPNVMFDNLTPHQSILPYVPELPDITASSMLMKGLSSFQYGSFMS-PIMHR 236

Query: 169 PKRLRGPEMLFP----GFNNELPLIDHFQNDNRGKVSPNFGLSF 50
            KRLR    L      G  NE  L D FQ+ +  K S +FGL F
Sbjct: 237 QKRLREATTLLSSFGGGMKNEFHLFDQFQDVD--KASQSFGLPF 278


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