BLASTX nr result

ID: Cimicifuga21_contig00040369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040369
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE01921.2| OSJNBb0078D11.4 [Oryza sativa Japonica Group]         120   8e-26
emb|CAE01961.2| OSJNBa0085H03.2 [Oryza sativa Japonica Group]         120   1e-25
ref|XP_003566271.1| PREDICTED: uncharacterized protein LOC100825...   116   2e-25
ref|XP_002442327.1| hypothetical protein SORBIDRAFT_08g018260 [S...   117   5e-25
dbj|BAD67842.1| ribosomal protein -like [Oryza sativa Japonica G...   117   8e-25

>emb|CAE01921.2| OSJNBb0078D11.4 [Oryza sativa Japonica Group]
          Length = 420

 Score =  120 bits (301), Expect(2) = 8e-26
 Identities = 60/119 (50%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
 Frame = -1

Query: 425 GWDNLHD--TKSPTMILKAVADKDLWIWHSYFGVLRRENDISTLYMSNVFKPLSNGTALE 252
           GW   +      PTMIL+AVA KDLWIWHS+FG+    NDI+ L  S +F+ L++GTA E
Sbjct: 215 GWKGQYSGHVDGPTMILEAVASKDLWIWHSFFGLPGSLNDINVLQRSPLFQRLTSGTAPE 274

Query: 251 CNFMVNENSYIHGYYLTDGIYLSWVTLIQALKRPKTRAKRVFTTCNESVRKDVECAFGV 75
             FMVN N Y  GYYL DGIY SW T ++ +  P+   +  +    E VRKDVE AFGV
Sbjct: 275 LEFMVNGNKYTMGYYLADGIYPSWATFVKTISNPQGNKRIHYAKVQEGVRKDVERAFGV 333



 Score = 21.6 bits (44), Expect(2) = 8e-26
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 441 NYPTAWVGQFT*H 403
           N PT W GQ++ H
Sbjct: 211 NCPTGWKGQYSGH 223


>emb|CAE01961.2| OSJNBa0085H03.2 [Oryza sativa Japonica Group]
          Length = 440

 Score =  120 bits (300), Expect(2) = 1e-25
 Identities = 60/119 (50%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
 Frame = -1

Query: 425 GWDNLHD--TKSPTMILKAVADKDLWIWHSYFGVLRRENDISTLYMSNVFKPLSNGTALE 252
           GW   +      PTMIL+AVA KDLWIWHS+FG+    NDI+ L  S +F+ L++GTA E
Sbjct: 220 GWKGQYSGHVDGPTMILEAVASKDLWIWHSFFGLPGSLNDINVLQRSPLFQRLTSGTAPE 279

Query: 251 CNFMVNENSYIHGYYLTDGIYLSWVTLIQALKRPKTRAKRVFTTCNESVRKDVECAFGV 75
             FMVN N Y  GYYL DGIYLSW T ++ +   +   +  +    E VRKDVE AFGV
Sbjct: 280 LEFMVNGNKYTMGYYLADGIYLSWATFVKTISNSQGNKRIHYAKVQEGVRKDVERAFGV 338



 Score = 21.6 bits (44), Expect(2) = 1e-25
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 441 NYPTAWVGQFT*H 403
           N PT W GQ++ H
Sbjct: 216 NCPTGWKGQYSGH 228


>ref|XP_003566271.1| PREDICTED: uncharacterized protein LOC100825708 [Brachypodium
           distachyon]
          Length = 432

 Score =  116 bits (290), Expect(2) = 2e-25
 Identities = 56/107 (52%), Positives = 74/107 (69%)
 Frame = -1

Query: 395 PTMILKAVADKDLWIWHSYFGVLRRENDISTLYMSNVFKPLSNGTALECNFMVNENSYIH 216
           PTMIL+AVA + LWIWHS+FG+    N I+ L  S +F+ L++GTA E  ++VN N Y  
Sbjct: 224 PTMILEAVASQYLWIWHSFFGLPGSLNGINVLQRSPLFQKLTSGTAPELEYVVNGNKYTM 283

Query: 215 GYYLTDGIYLSWVTLIQALKRPKTRAKRVFTTCNESVRKDVECAFGV 75
           GYYL DGIY SW T ++ +  P+   K+ F+T  E+VRKDVE AFGV
Sbjct: 284 GYYLADGIYPSWSTFVKTISNPEGNKKKHFSTMQEAVRKDVERAFGV 330



 Score = 24.6 bits (52), Expect(2) = 2e-25
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 441 NYPTAWVGQFT*H 403
           N PTAW GQ+T H
Sbjct: 208 NCPTAWKGQYTGH 220


>ref|XP_002442327.1| hypothetical protein SORBIDRAFT_08g018260 [Sorghum bicolor]
           gi|241943020|gb|EES16165.1| hypothetical protein
           SORBIDRAFT_08g018260 [Sorghum bicolor]
          Length = 576

 Score =  117 bits (292), Expect(2) = 5e-25
 Identities = 55/111 (49%), Positives = 70/111 (63%)
 Frame = -1

Query: 407 DTKSPTMILKAVADKDLWIWHSYFGVLRRENDISTLYMSNVFKPLSNGTALECNFMVNEN 228
           D K  T++L+AVA  DLWIWH++FG     NDI+ L  S +F  +  G A E  F+VN N
Sbjct: 236 DYKKATVMLEAVASHDLWIWHAFFGTAGSNNDINVLNQSTIFTEVLQGRAPEVQFVVNGN 295

Query: 227 SYIHGYYLTDGIYLSWVTLIQALKRPKTRAKRVFTTCNESVRKDVECAFGV 75
            Y  GYYLTDGIY  W T +++L +P +   +VF      VRKDVECAFGV
Sbjct: 296 VYNMGYYLTDGIYPEWATFVKSLPKPLSEKDKVFANKQAEVRKDVECAFGV 346



 Score = 22.3 bits (46), Expect(2) = 5e-25
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 441 NYPTAWVGQFT 409
           N P AW GQFT
Sbjct: 223 NCPVAWKGQFT 233


>dbj|BAD67842.1| ribosomal protein -like [Oryza sativa Japonica Group]
           gi|55296301|dbj|BAD68081.1| ribosomal protein -like
           [Oryza sativa Japonica Group]
          Length = 428

 Score =  117 bits (294), Expect = 8e-25
 Identities = 53/107 (49%), Positives = 72/107 (67%)
 Frame = -1

Query: 395 PTMILKAVADKDLWIWHSYFGVLRRENDISTLYMSNVFKPLSNGTALECNFMVNENSYIH 216
           PT+IL+AVA KDLWIWH++FG+    NDI+ L+ S +F  L+ G A E N+ +N + Y+ 
Sbjct: 223 PTIILEAVASKDLWIWHAFFGMPGSHNDINVLHRSPLFAKLAEGKAPEVNYSINRHDYMM 282

Query: 215 GYYLTDGIYLSWVTLIQALKRPKTRAKRVFTTCNESVRKDVECAFGV 75
           GYYL DGIY SW T ++ +  P    ++ F    E+VRKDVE AFGV
Sbjct: 283 GYYLADGIYPSWATFVKTIPEPHGNKRKYFAKAQEAVRKDVERAFGV 329


Top