BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040336
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
emb|CBI30973.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002521729.1| pentatricopeptide repeat-containing protein,...   109   3e-22
ref|XP_003612374.1| Pentatricopeptide repeat-containing protein ...   105   3e-21

>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/86 (68%), Positives = 71/86 (82%)
 Frame = -3

Query: 259 ISPYNSIIYGLYKENQLDEALTFLTKMGTLFPKAVNSSLRILGFCEEGVVEEAKRVYDEM 80
           ISPYNSIIYGLYK+NQ +EAL FLTKM  LFP+AV+ SLRILGFC EG + +AKRVYD+M
Sbjct: 476 ISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQM 535

Query: 79  IEEGCLPSTLVSVSLINSLCQLGDIR 2
           I+EG +PS LV V LI+  CQ G++R
Sbjct: 536 IKEGGVPSVLVYVCLIHGFCQDGNVR 561


>emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/86 (68%), Positives = 71/86 (82%)
 Frame = -3

Query: 259 ISPYNSIIYGLYKENQLDEALTFLTKMGTLFPKAVNSSLRILGFCEEGVVEEAKRVYDEM 80
           ISPYNSIIYGLYK+NQ +EAL FLTKM  LFP+AV+ SLRILGFC EG + +AKRVYD+M
Sbjct: 324 ISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQM 383

Query: 79  IEEGCLPSTLVSVSLINSLCQLGDIR 2
           I+EG +PS LV V LI+  CQ G++R
Sbjct: 384 IKEGGVPSVLVYVCLIHGFCQDGNVR 409


>ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|222856668|gb|EEE94215.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/86 (63%), Positives = 68/86 (79%)
 Frame = -3

Query: 259 ISPYNSIIYGLYKENQLDEALTFLTKMGTLFPKAVNSSLRILGFCEEGVVEEAKRVYDEM 80
           ISPYNS++YGLY++N L+EAL FL KM  LFP+AV+ SLRILGFCEEG ++EAKRVYD+M
Sbjct: 397 ISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQM 456

Query: 79  IEEGCLPSTLVSVSLINSLCQLGDIR 2
             EG +PS LV   LI+  CQ G +R
Sbjct: 457 NNEGGIPSALVYDCLIHGFCQEGCVR 482


>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 629

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/86 (60%), Positives = 66/86 (76%)
 Frame = -3

Query: 259 ISPYNSIIYGLYKENQLDEALTFLTKMGTLFPKAVNSSLRILGFCEEGVVEEAKRVYDEM 80
           ISPYNS++YGLYK+N  DEAL FL KM  LFP+AV+ SLRILGFCE+G V+ AK V+D+M
Sbjct: 421 ISPYNSVLYGLYKKNMWDEALEFLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQM 480

Query: 79  IEEGCLPSTLVSVSLINSLCQLGDIR 2
           I EG  P+ LV   L++  CQ G++R
Sbjct: 481 INEGGTPNILVYDCLVHGFCQEGNLR 506


>ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513709|gb|AES95332.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/86 (58%), Positives = 66/86 (76%)
 Frame = -3

Query: 259 ISPYNSIIYGLYKENQLDEALTFLTKMGTLFPKAVNSSLRILGFCEEGVVEEAKRVYDEM 80
           ISPYNSIIYGL+K+N+ DEA  FL KMG LFP+AV+ S+ I+  C+EG +E+AK +YD+M
Sbjct: 420 ISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKM 479

Query: 79  IEEGCLPSTLVSVSLINSLCQLGDIR 2
           I+EG +PS LV  SL++   Q G IR
Sbjct: 480 IDEGGIPSILVYNSLVHGFSQHGSIR 505



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
 Frame = -3

Query: 250 YNSIIYGLYKENQLDEALTFLTKM--GTLFPKAVNSSLRILGFCEEGVVEEAKRVYDEMI 77
           YNS+++G  +   + EA+  + +M     FP A   +  I  FCE+G +E A +  +++ 
Sbjct: 491 YNSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDIT 550

Query: 76  EEGCLPSTLVSVSLINSLCQLGDIR 2
             GC+P+T     LI+ LC+ GDI+
Sbjct: 551 ARGCVPNTETYSPLIDVLCRKGDIQ 575