BLASTX nr result

ID: Cimicifuga21_contig00040332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040332
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20875.3| unnamed protein product [Vitis vinifera]               67   1e-09
emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]    67   1e-09
ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002516553.1| hypothetical protein RCOM_0802530 [Ricinus c...    59   3e-07
ref|XP_002871479.1| predicted protein [Arabidopsis lyrata subsp....    55   6e-06

>emb|CBI20875.3| unnamed protein product [Vitis vinifera]
          Length = 1554

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 11/104 (10%)
 Frame = -2

Query: 303 EVRKCRHFSIRGFVSEVRKKNPKHYRPFATEVK----------LPPLRVPDFKYWGCENC 154
           E  KC+HFSIRG+V+EVRK++ K   PFA +            LPPL VP F++W C+NC
Sbjct: 69  EAEKCQHFSIRGYVAEVRKRDKKICWPFALDESHNKLEEQTCILPPLDVPKFRWWHCQNC 128

Query: 153 VKNAALENVEISNPHNSGLRPCVTSSLG-IVHMTSEGDASMCIL 25
           ++    +  E            V  S G  +HMTS G  ++ +L
Sbjct: 129 LQEIGTKASEKEIATVPSCNNTVYKSNGTCLHMTSRGAETVLLL 172


>emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]
          Length = 1388

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 11/104 (10%)
 Frame = -2

Query: 303 EVRKCRHFSIRGFVSEVRKKNPKHYRPFATEVK----------LPPLRVPDFKYWGCENC 154
           E  KC+HFSIRG+V+EVRK++ K   PFA +            LPPL VP F++W C+NC
Sbjct: 194 EAEKCQHFSIRGYVAEVRKRDKKICWPFALDESHNKLEEQTCILPPLDVPKFRWWHCQNC 253

Query: 153 VKNAALENVEISNPHNSGLRPCVTSSLG-IVHMTSEGDASMCIL 25
           ++    +  E            V  S G  +HMTS G  ++ +L
Sbjct: 254 LQEIGTKASEKEIATVPSCNNTVYKSNGTCLHMTSRGAETVLLL 297


>ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|222855527|gb|EEE93074.1|
           predicted protein [Populus trichocarpa]
          Length = 1309

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 10/61 (16%)
 Frame = -2

Query: 303 EVRKCRHFSIRGFVSEVRKKNPKHYRPFATE----------VKLPPLRVPDFKYWGCENC 154
           E  KC HFS+RG+VSE+RK++ K   PF ++            LPPL VP F++W C+NC
Sbjct: 43  EAEKCSHFSMRGYVSEIRKRDWKICWPFVSDGDSNNYEEQACLLPPLHVPKFRFWRCQNC 102

Query: 153 V 151
           V
Sbjct: 103 V 103


>ref|XP_002516553.1| hypothetical protein RCOM_0802530 [Ricinus communis]
           gi|223544373|gb|EEF45894.1| hypothetical protein
           RCOM_0802530 [Ricinus communis]
          Length = 1310

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 15/114 (13%)
 Frame = -2

Query: 303 EVRKCRHFSIRGFVSEVRKKNPKHYRPFATE------------VKLPPLRVPDFKYWGCE 160
           +   C HFSIRG+VSE+RKK+ K   PF +E             +LP L +P F+YW C+
Sbjct: 44  DAENCDHFSIRGYVSEIRKKDLKKCWPFVSESDCDSNKYDELACRLPSLHIPKFRYWRCQ 103

Query: 159 NCVKNAALENVEISNPHNSGLRPCVT--SSLGI-VHMTSEGDASMCILGSQEAR 7
            C+    ++   + N +   L+  V+     GI  H ++  D +M +   Q+A+
Sbjct: 104 KCLWE--IDTKGVGNDYGPMLKSYVSGFKPNGICCHASTFDDVTMLVSDFQQAQ 155


>ref|XP_002871479.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317316|gb|EFH47738.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1102

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 9/59 (15%)
 Frame = -2

Query: 294 KCRHFSIRGFVSEVRKKNPKHYRPFATE---------VKLPPLRVPDFKYWGCENCVKN 145
           KC HFSIRGFV+E R+++ +   PFA E           LP L VP F++W C +C+K+
Sbjct: 25  KCDHFSIRGFVAETRERDLRKCWPFAEESVSLVDQQNYSLPSLSVPKFRWWHCMSCIKD 83


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