BLASTX nr result

ID: Cimicifuga21_contig00040331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040331
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282549.1| PREDICTED: homocysteine S-methyltransferase ...    64   1e-08
ref|XP_002315941.1| homocysteine s-methyltransferase [Populus tr...    63   3e-08
ref|XP_002531629.1| 5-methyltetrahydrofolate:homocysteine methyl...    62   4e-08
ref|XP_002875290.1| ATHMT-1/HMT-1 [Arabidopsis lyrata subsp. lyr...    60   1e-07
gb|AFK33865.1| unknown [Lotus japonicus]                               59   3e-07

>ref|XP_002282549.1| PREDICTED: homocysteine S-methyltransferase 1 [Vitis vinifera]
           gi|297737821|emb|CBI27022.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +2

Query: 2   LYATRWRDSGASLIGGCCRTTPSTIQVISKVLKQ 103
           LYAT+WRD GA LIGGCCRTTPSTI+ ISKVLK+
Sbjct: 290 LYATKWRDLGAKLIGGCCRTTPSTIRAISKVLKE 323


>ref|XP_002315941.1| homocysteine s-methyltransferase [Populus trichocarpa]
           gi|222864981|gb|EEF02112.1| homocysteine
           s-methyltransferase [Populus trichocarpa]
          Length = 329

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   LYATRWRDSGASLIGGCCRTTPSTIQVISKVLK 100
           ++ATRW D GASLIGGCCRTTPSTIQ ISKVLK
Sbjct: 292 VFATRWHDLGASLIGGCCRTTPSTIQAISKVLK 324


>ref|XP_002531629.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
           [Ricinus communis] gi|223528747|gb|EEF30757.1|
           5-methyltetrahydrofolate:homocysteine methyltransferase,
           putative [Ricinus communis]
          Length = 327

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +2

Query: 5   YATRWRDSGASLIGGCCRTTPSTIQVISKVLKQR 106
           +ATRW D GA+LIGGCCRTTPSTI+ ISKVLK+R
Sbjct: 293 FATRWHDLGANLIGGCCRTTPSTIRAISKVLKER 326


>ref|XP_002875290.1| ATHMT-1/HMT-1 [Arabidopsis lyrata subsp. lyrata]
           gi|297321128|gb|EFH51549.1| ATHMT-1/HMT-1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 326

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +2

Query: 2   LYATRWRDSGASLIGGCCRTTPSTIQVISKVLKQR 106
           ++AT+WRD GA LIGGCCRTTPSTI+ ISK LK+R
Sbjct: 292 MFATKWRDLGAKLIGGCCRTTPSTIKAISKDLKRR 326


>gb|AFK33865.1| unknown [Lotus japonicus]
          Length = 328

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +2

Query: 5   YATRWRDSGASLIGGCCRTTPSTIQVISKVLKQ 103
           +ATRWRD GA +IGGCCRTTPSTIQVIS  L++
Sbjct: 294 HATRWRDLGAKIIGGCCRTTPSTIQVISNALRE 326


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