BLASTX nr result

ID: Cimicifuga21_contig00040315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040315
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266187.2| PREDICTED: probable LRR receptor-like serine...    55   6e-06
emb|CAN83670.1| hypothetical protein VITISV_017867 [Vitis vinifera]    55   6e-06

>ref|XP_002266187.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase RLK-like [Vitis vinifera]
           gi|297736026|emb|CBI24064.3| unnamed protein product
           [Vitis vinifera]
          Length = 633

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 45/131 (34%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
 Frame = +3

Query: 3   KLESYCALKNMFLFNNHFVGEIPDDAFMLCSD*KRC----------AGFKMDLQVKILEL 152
           K++   ALK++FL NN F GEI DDAF      K+               + L  +ILEL
Sbjct: 116 KIKKLSALKSVFLSNNQFSGEIEDDAFSGMVSLKKVHLAHNKFSGGVPESLALLPRILEL 175

Query: 153 SLDVNQLRSKVLEFL*KDQNFINVS-NCLEGGIPRSLSKMRPMFLSFFK----------P 299
            L+ N  + ++ EF        N+S N LEG IP SL KM     S  K          P
Sbjct: 176 RLEGNHFKGQIPEFRATQLQSFNISNNNLEGPIPESLRKMELTSFSGNKNLCGAPLGSCP 235

Query: 300 GPQKTTTMIFL 332
            P+K TT++ +
Sbjct: 236 RPKKPTTLMMV 246


>emb|CAN83670.1| hypothetical protein VITISV_017867 [Vitis vinifera]
          Length = 633

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 45/131 (34%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
 Frame = +3

Query: 3   KLESYCALKNMFLFNNHFVGEIPDDAFMLCSD*KRC----------AGFKMDLQVKILEL 152
           K++   ALK++FL NN F GEI DDAF      K+               + L  +ILEL
Sbjct: 116 KIKKLSALKSVFLSNNQFSGEIEDDAFSGMVSLKKVHLAHNKFSGGVPESLALLPRILEL 175

Query: 153 SLDVNQLRSKVLEFL*KDQNFINVS-NCLEGGIPRSLSKMRPMFLSFFK----------P 299
            L+ N  + ++ EF        N+S N LEG IP SL KM     S  K          P
Sbjct: 176 RLEGNHFKGQIPEFRATQLQSFNISNNNLEGPIPESLRKMELTSFSGNKNLCGAPLGSCP 235

Query: 300 GPQKTTTMIFL 332
            P+K TT++ +
Sbjct: 236 RPKKPTTLMMV 246


Top