BLASTX nr result

ID: Cimicifuga21_contig00040301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040301
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152680.1| PREDICTED: ribosomal RNA small subunit methy...   104   6e-21
emb|CBI19761.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methy...   103   1e-20
ref|XP_002891309.1| tetrapyrrole methylase family protein [Arabi...   100   2e-19
gb|AAF69160.1|AC007915_12 F27F5.18 [Arabidopsis thaliana]              99   3e-19

>ref|XP_004152680.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like
           [Cucumis sativus] gi|449515758|ref|XP_004164915.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           I-like [Cucumis sativus]
          Length = 365

 Score =  104 bits (260), Expect = 6e-21
 Identities = 50/80 (62%), Positives = 58/80 (72%)
 Frame = +1

Query: 1   ELAKLCIKEKIPVIPIXXXXXXXXXXXXXXXXTMEFTFVGFLPKHAASRKERMLVSANET 180
           EL +LC+ E IPV+P+                T EFTFVGFLPKHAASR+ER++VSANE 
Sbjct: 171 ELVRLCVNENIPVVPVPGPSAVVAAISASGLSTDEFTFVGFLPKHAASRRERLMVSANEE 230

Query: 181 VTQIFYVPPHKLQQFLEETS 240
            TQIFYVPPHKL+QFLEETS
Sbjct: 231 ATQIFYVPPHKLKQFLEETS 250


>emb|CBI19761.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/81 (62%), Positives = 57/81 (70%)
 Frame = +1

Query: 1   ELAKLCIKEKIPVIPIXXXXXXXXXXXXXXXXTMEFTFVGFLPKHAASRKERMLVSANET 180
           ELAKLC+ E IPVIPI                T EFTFVGFLPKHA SR+ER+ VSANE 
Sbjct: 181 ELAKLCVDENIPVIPIPGPSALVAALSASGLATNEFTFVGFLPKHAGSRRERLTVSANEA 240

Query: 181 VTQIFYVPPHKLQQFLEETST 243
            TQ+F+VPPHKL QFLEETS+
Sbjct: 241 ATQVFFVPPHKLHQFLEETSS 261


>ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 351

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/81 (62%), Positives = 57/81 (70%)
 Frame = +1

Query: 1   ELAKLCIKEKIPVIPIXXXXXXXXXXXXXXXXTMEFTFVGFLPKHAASRKERMLVSANET 180
           ELAKLC+ E IPVIPI                T EFTFVGFLPKHA SR+ER+ VSANE 
Sbjct: 158 ELAKLCVDENIPVIPIPGPSALVAALSASGLATNEFTFVGFLPKHAGSRRERLTVSANEA 217

Query: 181 VTQIFYVPPHKLQQFLEETST 243
            TQ+F+VPPHKL QFLEETS+
Sbjct: 218 ATQVFFVPPHKLHQFLEETSS 238


>ref|XP_002891309.1| tetrapyrrole methylase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337151|gb|EFH67568.1| tetrapyrrole
           methylase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 342

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/80 (62%), Positives = 57/80 (71%)
 Frame = +1

Query: 1   ELAKLCIKEKIPVIPIXXXXXXXXXXXXXXXXTMEFTFVGFLPKHAASRKERMLVSANET 180
           +LAK+C KE I VIPI                T EFTFVGFLPKH+ +RKER++VS+NET
Sbjct: 148 QLAKMCAKENIDVIPIPGACAVVAALSASGLDTDEFTFVGFLPKHSGTRKERLVVSSNET 207

Query: 181 VTQIFYVPPHKLQQFLEETS 240
            TQIFYVPPHKL QFLEETS
Sbjct: 208 RTQIFYVPPHKLSQFLEETS 227


>gb|AAF69160.1|AC007915_12 F27F5.18 [Arabidopsis thaliana]
          Length = 366

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/80 (61%), Positives = 57/80 (71%)
 Frame = +1

Query: 1   ELAKLCIKEKIPVIPIXXXXXXXXXXXXXXXXTMEFTFVGFLPKHAASRKERMLVSANET 180
           +LAK+C KE I VIPI                T EFTFVGFLPKH+ +RKER++VS+NET
Sbjct: 141 QLAKMCAKENIDVIPIPGACAVVAALSASGLETDEFTFVGFLPKHSGTRKERLIVSSNET 200

Query: 181 VTQIFYVPPHKLQQFLEETS 240
            TQIFYVPPHKL QFLEET+
Sbjct: 201 RTQIFYVPPHKLSQFLEETT 220


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