BLASTX nr result
ID: Cimicifuga21_contig00040301
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00040301 (244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004152680.1| PREDICTED: ribosomal RNA small subunit methy... 104 6e-21 emb|CBI19761.3| unnamed protein product [Vitis vinifera] 103 1e-20 ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methy... 103 1e-20 ref|XP_002891309.1| tetrapyrrole methylase family protein [Arabi... 100 2e-19 gb|AAF69160.1|AC007915_12 F27F5.18 [Arabidopsis thaliana] 99 3e-19 >ref|XP_004152680.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like [Cucumis sativus] gi|449515758|ref|XP_004164915.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like [Cucumis sativus] Length = 365 Score = 104 bits (260), Expect = 6e-21 Identities = 50/80 (62%), Positives = 58/80 (72%) Frame = +1 Query: 1 ELAKLCIKEKIPVIPIXXXXXXXXXXXXXXXXTMEFTFVGFLPKHAASRKERMLVSANET 180 EL +LC+ E IPV+P+ T EFTFVGFLPKHAASR+ER++VSANE Sbjct: 171 ELVRLCVNENIPVVPVPGPSAVVAAISASGLSTDEFTFVGFLPKHAASRRERLMVSANEE 230 Query: 181 VTQIFYVPPHKLQQFLEETS 240 TQIFYVPPHKL+QFLEETS Sbjct: 231 ATQIFYVPPHKLKQFLEETS 250 >emb|CBI19761.3| unnamed protein product [Vitis vinifera] Length = 374 Score = 103 bits (258), Expect = 1e-20 Identities = 51/81 (62%), Positives = 57/81 (70%) Frame = +1 Query: 1 ELAKLCIKEKIPVIPIXXXXXXXXXXXXXXXXTMEFTFVGFLPKHAASRKERMLVSANET 180 ELAKLC+ E IPVIPI T EFTFVGFLPKHA SR+ER+ VSANE Sbjct: 181 ELAKLCVDENIPVIPIPGPSALVAALSASGLATNEFTFVGFLPKHAGSRRERLTVSANEA 240 Query: 181 VTQIFYVPPHKLQQFLEETST 243 TQ+F+VPPHKL QFLEETS+ Sbjct: 241 ATQVFFVPPHKLHQFLEETSS 261 >ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like [Vitis vinifera] Length = 351 Score = 103 bits (258), Expect = 1e-20 Identities = 51/81 (62%), Positives = 57/81 (70%) Frame = +1 Query: 1 ELAKLCIKEKIPVIPIXXXXXXXXXXXXXXXXTMEFTFVGFLPKHAASRKERMLVSANET 180 ELAKLC+ E IPVIPI T EFTFVGFLPKHA SR+ER+ VSANE Sbjct: 158 ELAKLCVDENIPVIPIPGPSALVAALSASGLATNEFTFVGFLPKHAGSRRERLTVSANEA 217 Query: 181 VTQIFYVPPHKLQQFLEETST 243 TQ+F+VPPHKL QFLEETS+ Sbjct: 218 ATQVFFVPPHKLHQFLEETSS 238 >ref|XP_002891309.1| tetrapyrrole methylase family protein [Arabidopsis lyrata subsp. lyrata] gi|297337151|gb|EFH67568.1| tetrapyrrole methylase family protein [Arabidopsis lyrata subsp. lyrata] Length = 342 Score = 100 bits (248), Expect = 2e-19 Identities = 50/80 (62%), Positives = 57/80 (71%) Frame = +1 Query: 1 ELAKLCIKEKIPVIPIXXXXXXXXXXXXXXXXTMEFTFVGFLPKHAASRKERMLVSANET 180 +LAK+C KE I VIPI T EFTFVGFLPKH+ +RKER++VS+NET Sbjct: 148 QLAKMCAKENIDVIPIPGACAVVAALSASGLDTDEFTFVGFLPKHSGTRKERLVVSSNET 207 Query: 181 VTQIFYVPPHKLQQFLEETS 240 TQIFYVPPHKL QFLEETS Sbjct: 208 RTQIFYVPPHKLSQFLEETS 227 >gb|AAF69160.1|AC007915_12 F27F5.18 [Arabidopsis thaliana] Length = 366 Score = 99.4 bits (246), Expect = 3e-19 Identities = 49/80 (61%), Positives = 57/80 (71%) Frame = +1 Query: 1 ELAKLCIKEKIPVIPIXXXXXXXXXXXXXXXXTMEFTFVGFLPKHAASRKERMLVSANET 180 +LAK+C KE I VIPI T EFTFVGFLPKH+ +RKER++VS+NET Sbjct: 141 QLAKMCAKENIDVIPIPGACAVVAALSASGLETDEFTFVGFLPKHSGTRKERLIVSSNET 200 Query: 181 VTQIFYVPPHKLQQFLEETS 240 TQIFYVPPHKL QFLEET+ Sbjct: 201 RTQIFYVPPHKLSQFLEETT 220